Home    Target List    Selection    Community Requests    Clones    Screenings    XML files    Diffraction Images    Progress    Homolog Search    Clustering    Statistics    News    Help    Log In

Publications

    2011
  1. Yeats C, Lees J, Carter P, Sillitoe I, Orengo C (2011)
    The Gene3D Web Services: a platform for identifying, annotating and comparing structural domains in protein sequences.
    Nucleic Acids Research,39:W546-50 (Details) (Abstract)
    Times cited: 6
    2. 2012
  2. Halavaty AS, Borek D, Tyson GH, Veesenmeyer JL, Shuvalova L, Minasov G, Otwinowski Z, Hauser AR, Anderson WF (2012)
    Structure of the Type III Secretion Effector Protein ExoU in Complex with Its Chaperone SpcU.
    PLoS ONE,7:e49388 (Details) (Abstract)
    Times cited: 0
  3. Austin SK, Dowd KA, Shrestha B, Nelson CA, Edeling MA, Johnson S, Pierson TC, Diamond MS, Fremont DH (2012)
    Structural basis of differential neutralization of DENV-1 genotypes by an antibody that recognizes a cryptic epitope.
    PLos Pathogens,8:e1002930 (Details) (Abstract)
    Times cited: 3
  4. Target: IDP90195
    McCoy WH, Wang X, Yokoyama WM, Hansen TH, Fremont DH (2012)
    Structural mechanism of ER retrieval of MHC class I by cowpox.
    PLoS Biology,10:e1001432 (Details) (Abstract)
    Times cited: 0
    5. 2013
  5. Lewis TE, Sillitoe I, Andreeva A, Blundell TL, Buchan DW, Chothia C, Cuff A, Dana JM, Filippis I, Gough J, Hunter S, Jones DT, Kelley LA, Kleywegt GJ, Minneci F, Mitchell A, Murzin AG, Ochoa-Montaño B, Rackham OJ, Smith J, Sternberg MJ, Velankar S, Yeats C, Orengo C (2013)
    Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains.
    Nucleic Acids Research,41:D499-507 (Details) (Abstract)
    Times cited: 1
  6. Sillitoe I, Cuff AL, Dessailly BH, Dawson NL, Furnham N, Lee D, Lees JG, Lewis TE, Studer RA, Rentzsch R, Yeats C, Thornton JM, Orengo CA (2013)
    New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structures.
    Nucleic Acids Research,41:D490-8 (Details) (Abstract)
    Times cited: 0
    7. 2012
  7. Lees J, Yeats C, Perkins J, Sillitoe I, Rentzsch R, Dessailly BH, Orengo C (2012)
    Gene3D: a domain-based resource for comparative genomics, functional annotation and protein network analysis.
    Nucleic Acids Research,40:D465-71 (Details) (Abstract)
    Times cited: 8
  8. Hunter S, Jones P, Mitchell A, Apweiler R, Attwood TK, Bateman A, Bernard T, Binns D, Bork P, Burge S, de Castro E, Coggill P, Corbett M, Das U, Daugherty L, Duquenne L, Finn RD, Fraser M, Gough J, Haft D, Hulo N, Kahn D, Kelly E, Letunic I, Lonsdale D, Lopez R, Madera M, Maslen J, McAnulla C, McDowall J, McMenamin C, Mi H, Mutowo-Muellenet P, Mulder N, Natale D, Orengo C, Pesseat S, Punta M, Quinn AF, Rivoire C, Sangrador-Vegas A, Selengut JD, Sigrist CJ, Scheremetjew M, Tate J, Thimmajanarthanan M, Thomas PD, Wu CH, Yeats C, Yong SY (2012)
    InterPro in 2011: new developments in the family and domain prediction database.
    Nucleic Acids Research,40:D306-12 (Details) (Abstract)
    Times cited: 68
  9. Target: IDP00348
    Light SH, Halavaty AS, Minasov G, Shuvalova L, Anderson WF (2012)
    Structural analysis of a 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase with an N-terminal chorismate mutase-like regulatory domain.
    Protein Science,21:887-95 (Details) (Abstract)
    Times cited: 2
    10. 2013
  10. Target: IDP00260
    Lazear E, Peterson LW, Nelson CA, Fremont DH (2013)
    Crystal Structure of the Cowpox Virus-Encoded NKG2D Ligand OMCP.
    Journal of Virology,87:840-50 (Details) (Abstract)
    Times cited: 0
change view

Page 1 of 5, showing 10 records out of 48 total, starting on record 1, ending on 10

Pmid Authors Title Journal Issn Year Vol Pages Center Target Pdb Type Times Cited
21646335 Yeats C, Lees J, Carter P, Sillitoe I, Orengo C The Gene3D Web Services: a platform for identifying, annotating and comparing structural domains in protein sequences. Nucleic Acids Research 2011 39 W546-50 CSGID other 6
23166655 Halavaty AS, Borek D, Tyson GH, Veesenmeyer JL, Shuvalova L, Minasov G, Otwinowski Z, Hauser AR, Anderson WF Structure of the Type III Secretion Effector Protein ExoU in Complex with Its Chaperone SpcU. PLoS ONE 2012 7 e49388 CSGID 3TU3 structure
23055922 Austin SK, Dowd KA, Shrestha B, Nelson CA, Edeling MA, Johnson S, Pierson TC, Diamond MS, Fremont DH Structural basis of differential neutralization of DENV-1 genotypes by an antibody that recognizes a cryptic epitope. PLos Pathogens 2012 8 e1002930 CSGID 4FFY, 4FFZ structure 3
23209377 McCoy WH, Wang X, Yokoyama WM, Hansen TH, Fremont DH Structural mechanism of ER retrieval of MHC class I by cowpox. PLoS Biology 2012 10 e1001432 CSGID IDP90195 4HKJ structure
23203986 Lewis TE, Sillitoe I, Andreeva A, Blundell TL, Buchan DW, Chothia C, Cuff A, Dana JM, Filippis I, Gough J, Hunter S, Jones DT, Kelley LA, Kleywegt GJ, Minneci F, Mitchell A, Murzin AG, Ochoa-Montaño B, Rackham OJ, Smith J, Sternberg MJ, Velankar S, Yeats C, Orengo C Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains. Nucleic Acids Research 2013 41 D499-507 CSGID other 1
23203873 Sillitoe I, Cuff AL, Dessailly BH, Dawson NL, Furnham N, Lee D, Lees JG, Lewis TE, Studer RA, Rentzsch R, Yeats C, Thornton JM, Orengo CA New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structures. Nucleic Acids Research 2013 41 D490-8 CSGID other
22139938 Lees J, Yeats C, Perkins J, Sillitoe I, Rentzsch R, Dessailly BH, Orengo C Gene3D: a domain-based resource for comparative genomics, functional annotation and protein network analysis. Nucleic Acids Research 2012 40 D465-71 CSGID other 8
22096229 Hunter S, Jones P, Mitchell A, Apweiler R, Attwood TK, Bateman A, Bernard T, Binns D, Bork P, Burge S, de Castro E, Coggill P, Corbett M, Das U, Daugherty L, Duquenne L, Finn RD, Fraser M, Gough J, Haft D, Hulo N, Kahn D, Kelly E, Letunic I, Lonsdale D, Lopez R, Madera M, Maslen J, McAnulla C, McDowall J, McMenamin C, Mi H, Mutowo-Muellenet P, Mulder N, Natale D, Orengo C, Pesseat S, Punta M, Quinn AF, Rivoire C, Sangrador-Vegas A, Selengut JD, Sigrist CJ, Scheremetjew M, Tate J, Thimmajanarthanan M, Thomas PD, Wu CH, Yeats C, Yong SY InterPro in 2011: new developments in the family and domain prediction database. Nucleic Acids Research 2012 40 D306-12 CSGID other 68
22505283 Light SH, Halavaty AS, Minasov G, Shuvalova L, Anderson WF Structural analysis of a 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase with an N-terminal chorismate mutase-like regulatory domain. Protein Science 2012 21 887-95 CSGID IDP00348 3NVT, 3TFC structure 2
23115291 Lazear E, Peterson LW, Nelson CA, Fremont DH Crystal Structure of the Cowpox Virus-Encoded NKG2D Ligand OMCP. Journal of Virology 2013 87 840-50 CSGID IDP00260 4FFE structure
change view


<< previous | 1 | 2 | 3 | 4 | 5 |