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| CSGID ID | Priority | Locus Tag | NCBI GI | Gene Name |
Common Name | Sequence Length |
Comment | Project | Homolog PDB ID |
Homolog Sequence Identity |
Target Organism | TIGR Main Role | TIGR Subrole | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| IDP90163 | 8 | 172044608 | 3-dehydroquinate dehydratase (3-dehydroq... | 255 | Community Requests | 1GQN | 53.3% | Clostridium difficile | ||||||||||||||||||||||
| IDP90165 | 8 | 123174271 | 3-phosphoshikimate 1-carboxyvinyltransfe... | 437 | Community Requests | 1G6S | 31.4% | Clostridium difficile | ||||||||||||||||||||||
| IDP90162 | 8 | 123174272 | 3-dehydroquinate synthase | 354 | Community Requests | 1DQS | 37% | Clostridium difficile | ||||||||||||||||||||||
| IDP90164 | 8 | 122973876 | Putative chorismate biosynthesis-related... | 337 | Community Requests | 1RZM | 47.2% | Clostridium difficile | ||||||||||||||||||||||
| IDP90166 | 8 | 122379558 | aroE | Shikimate dedydrogenase | 269 | Community Requests | 1NVT | 37.9% | Clostridium difficile | |||||||||||||||||||||
| IDP00254 | 1 | 13272205 | Japanese encephalitis virus Envelope pro... | 406 | Entry and Cell-Cell Fusion: Contains receptor binding sites and fusogenic domain... | October 2007 | 2HG0 | 75.6% | Japanese encephalitis | |||||||||||||||||||||
| IDP90161 | 8 | 123174273 | Chorismate synthase (5-enolpyruvylshikim... | 359 | Community Requests | 1UM0 | 38.7% | Clostridium difficile | ||||||||||||||||||||||
| IDP90167 | 8 | 123066836 | Shikimate kinase | 177 | Community Requests | 2PT5 | 31.6% | Clostridium difficile | ||||||||||||||||||||||
| IDP90100 | 8 | ZZZ_0016 | 849 | Justification:This protein is a component of a type VI secretion system of enter... | Community Requests | 1QVR | 37.1% | Escherichia coli | ||||||||||||||||||||||
| IDP90099 | 8 | ZZZ_0015 | 1137 | Justification:This protein is a component of a type VI secretion system of enter... | Community Requests | Escherichia coli | ||||||||||||||||||||||||
| IDP90098 | 8 | ZZZ_0014 | 196 | Justification:This protein is a component of a type VI secretion system of enter... | Community Requests | Escherichia coli | ||||||||||||||||||||||||
| IDP90097 | 8 | ZZZ_0013 | 104 | Justification:This protein is a component of a type VI secretion system of enter... | Community Requests | Escherichia coli | ||||||||||||||||||||||||
| IDP90096 | 8 | ZZZ_0012 | 476 | Justification:This protein is a component of a type VI secretion system of enter... | Community Requests | Escherichia coli | ||||||||||||||||||||||||
| IDP90095 | 8 | ZZZ_0011 | 184 | Justification:This protein is a component of a type VI secretion system of enter... | Community Requests | Escherichia coli | ||||||||||||||||||||||||
| IDP90094 | 8 | ZZZ_0010 | 358 | Justification:This protein is a component of a type VI secretion system of enter... | Community Requests | Escherichia coli | ||||||||||||||||||||||||
| IDP90093 | 8 | ZZZ_0009 | 99 | Justification:This protein is a component of a type VI secretion system of enter... | Community Requests | Escherichia coli | ||||||||||||||||||||||||
| IDP90092 | 8 | ZZZ_0008 | 155 | Justification:This protein is a component of a type VI secretion system of enter... | Community Requests | Escherichia coli | ||||||||||||||||||||||||
| IDP90091 | 8 | ZZZ_0007 | 660 | Justification:This protein is a component of a type VI secretion system of enter... | Community Requests | 2P5Z | 15.6% | Escherichia coli | ||||||||||||||||||||||
| IDP90090 | 8 | ZZZ_0006 | 310 | Justification:This protein is a component of a type VI secretion system of enter... | Community Requests | Escherichia coli | ||||||||||||||||||||||||
| IDP90089 | 8 | ZZZ_0005 | 600 | Justification:This protein is a component of a type VI secretion system of enter... | Community Requests | Escherichia coli | ||||||||||||||||||||||||
| IDP90088 | 8 | ZZZ_0004 | 140 | Justification:This protein is a component of a type VI secretion system of enter... | Community Requests | Escherichia coli | ||||||||||||||||||||||||
| IDP90087 | 8 | ZZZ_0003 | 168 | Justification:This protein is a component of a type VI secretion system of enter... | Community Requests | Escherichia coli | ||||||||||||||||||||||||
| IDP90086 | 8 | ZZZ_0002 | 492 | Justification:This protein is a component of a type VI secretion system of enter... | Community Requests | Escherichia coli | ||||||||||||||||||||||||
| IDP90085 | 8 | ZZZ_0001 | 158 | Justification:This protein is a component of a type VI secretion system of enter... | Community Requests | Escherichia coli | ||||||||||||||||||||||||
| IDP90084 | 8 | ZP_01795673 | 145640079 | 148 | Justification:The protein we would like structure analyzed is from Haemophilus i... | Community Requests | 1KLX | 21.6% | Haemophilus influenzae | |||||||||||||||||||||
| IDP90083 | 8 | ZP_01795671 | 145640077 | 219 | Justification:The protein we would like structure analyzed is from Haemophilus i... | Community Requests | 1OUV | 23.7% | Haemophilus influenzae | |||||||||||||||||||||
| IDP90007 | 8 | Z4378 | 12517596 | quorum sensing Escherichia coli regulato... | 449 | Known ligands - AI3, epinephrine, norepinephrine; Inhibitors - ~75 aromatic com... | Community Requests | 2C2A | 14.9% | Escherichia coli | ||||||||||||||||||||
| IDP90005 | 8 | Z4377 | 12517595 | quorum sensing Escherichia coli regulato... | 219 | We can utilize the same inhibitors that block virulence in quorum sensing Escher... | Community Requests | 1KGS | 40.6% | Escherichia coli | ||||||||||||||||||||
| IDP01823 | 1 | YPPCP1.05c | 16082684 | pst | pesticin [Yersinia pestis CO92] | 357 | N/A | June 2008 | Yersinia pestis | Regulatory functions | Other | |||||||||||||||||||
| IDP00427 | 1 | YPO4119 | 16124227 | glmU | bifunctional N-acetylglucosamine-1-phosp... | 456 | Drug Target Function | March 2008 | 1HV9 | 82.2% | Yersinia pestis | Cell envelope | Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides | |||||||||||||||||
| IDP00543 | 1 | YPO4057 | 16124173 | fdoH | formate dehydrogenase-O, iron-sulfur sub... | 323 | Conserved Gene / Pathway | March 2008 | 1KQF | 70.9% | Yersinia pestis | Energy metabolism | Anaerobic | |||||||||||||||||
| IDP00405 | 1 | YPO4025 | 16124148 | putative iron ABC transporter, ATP-bindi... | 252 | Conserved Gene / Pathway | March 2008 | 2IT1 | 29.4% | Yersinia pestis | Transport and binding proteins | Unknown substrate | ||||||||||||||||||
| IDP00176 | 1 | YPO4024 | 16124147 | - | putative iron transport permease | 335 | Virulence | October 2007 | 2QI9 | 23.9% | Yersinia pestis | Hypothetical proteins | Conserved | |||||||||||||||||
| IDP00516 | 1 | YPO4022 | 16124145 | putative iron transport protein | 317 | Conserved Gene / Pathway | March 2008 | 2CHU | 31.5% | Yersinia pestis | Transport and binding proteins | Unknown substrate | ||||||||||||||||||
| IDP00569 | 1 | YPO4016 | 16124139 | hutH | histidine ammonia-lyase | 510 | Drug Target Function | March 2008 | 1B8F | 77.6% | Yersinia pestis | Energy metabolism | Amino acids and amines | |||||||||||||||||
| IDP00536 | 1 | YPO4003 | 16124128 | dppA | periplasmic dipeptide transport protein ... | 535 | Virulence Associated Factor | March 2008 | 1DPP | 81.5% | Yersinia pestis | Transport and binding proteins | Amino acids, peptides and amines | |||||||||||||||||
| IDP00573 | 1 | YPO3991 | 16124118 | putative insulinase family protease | 499 | Drug Target Function | March 2008 | 1HR6 | 12% | Yersinia pestis | Protein fate | Degradation of proteins, peptides, and glycopeptides | ||||||||||||||||||
| IDP02650 | 1 | YPO3962 | 16124090 | sugar-binding transport protein [Yersini... | 314 | N/A | June 2008 | 2IOY | 34.7% | Yersinia pestis | Transport and binding proteins | Carbohydrates, organic alcohols, and acids | ||||||||||||||||||
| IDP00553 | 1 | YPO3939 | 16124067 | glgA | glycogen synthase | 476 | Drug Target Function | March 2008 | 2QZS | 71.4% | Yersinia pestis | Energy metabolism | Biosynthesis and degradation of polysaccharides | |||||||||||||||||
| IDP00226 | 1 | YPO3938 | 16124066 | glgP | glycogen phosphorylase | 815 | Virulence | October 2007 | 1EM6 | 49.9% | Yersinia pestis | Cell envelope | Biosynthesis and degradation of murein sacculus and peptidoglycan | |||||||||||||||||
| IDP00203 | 1 | YPO3925 | 16124056 | argB | acetylglutamate kinase | 257 | Virulence | October 2007 | 1GS5 | 84% | Yersinia pestis | Transport and binding proteins | Amino acids, peptides and amines | |||||||||||||||||
| IDP00537 | 1 | YPO3924 | 16124055 | argH | argininosuccinate lyase | 457 | Conserved Gene / Pathway | March 2008 | 1TJ7 | 88.8% | Yersinia pestis | Amino acid biosynthesis | Glutamate family | |||||||||||||||||
| IDP00515 | 1 | YPO3922 | 16124053 | hemophore HasA | 205 | Virulence Associated Factor | March 2008 | 1B2V | 29.8% | Yersinia pestis | Unclassified | Role category not yet assigned | ||||||||||||||||||
| IDP00597 | 1 | YPO3909 | 16124041 | murI | glutamate racemase | 287 | Conserved Gene / Pathway | March 2008 | 2JFN | 71.4% | Yersinia pestis | Cell envelope | Biosynthesis and degradation of murein sacculus and peptidoglycan | |||||||||||||||||
| IDP02064 | 1 | YPO3878 | 16124011 | putative fimbrial chaperone [Yersinia pe... | 243 | N/A | June 2008 | 1P5U | 28.8% | Yersinia pestis | Protein fate | Protein folding and stabilization | ||||||||||||||||||
| IDP00425 | 1 | YPO3863 | 16123998 | wecC | UDP-N-acetyl-D-mannosamine dehydrogenase... | 420 | Conserved Gene / Pathway | March 2008 | 2O3J | 29.8% | Yersinia pestis | Cell envelope | Biosynthesis and degradation of murein sacculus and peptidoglycan | |||||||||||||||||
| IDP00560 | 1 | YPO3852 | 16123987 | hemY | putative protoheme IX biogenesis protein... | 406 | Conserved Gene / Pathway | March 2008 | Yersinia pestis | Unknown function | General | |||||||||||||||||||
| IDP00477 | 1 | YPO3845 | 16123980 | dapF | diaminopimelate epimerase | 274 | Conserved Gene / Pathway | March 2008 | 1GQZ | 75.9% | Yersinia pestis | Amino acid biosynthesis | Aspartate family | |||||||||||||||||
| IDP00445 | 1 | YPO3843 | 16123978 | xerC | site-specific tyrosine recombinase XerC ... | 303 | Conserved Gene / Pathway | March 2008 | 1A0P | 35.6% | Yersinia pestis | DNA metabolism | DNA replication, recombination, and repair | |||||||||||||||||
| IDP01788 | 1 | YPO3827 | 16123962 | glpQ | glycerophosphodiester phosphodiesterase ... | 371 | N/A | June 2008 | 1YDY | 71.7% | Yersinia pestis | Central intermediary metabolism | Other | |||||||||||||||||
| IDP00549 | 1 | YPO3814 | 16123948 | ftsY | cell division protein | 541 | Conserved Gene / Pathway | March 2008 | 2QY9 | 49% | Yersinia pestis | Cellular processes | Cell division | |||||||||||||||||
| IDP00547 | 1 | YPO3813 | 16123947 | ftsE | cell division protein FtsE | 222 | Conserved Gene / Pathway | March 2008 | 3DHW | 39.6% | Yersinia pestis | Cellular processes | Cell division | |||||||||||||||||
| IDP00475 | 1 | YPO3808 | 16123942 | livK | branched-chain amino acid-binding protei... | 371 | Virulence Associated Factor | March 2008 | 1USG | 71.7% | Yersinia pestis | Transport and binding proteins | Amino acids, peptides and amines | |||||||||||||||||
| IDP00586 | 1 | YPO3789 | 16123923 | metR | lysR-family transcriptional regulatory p... | 317 | Virulence Associated Factor | March 2008 | 1AL3 | 23.7% | Yersinia pestis | Amino acid biosynthesis | Aspartate family | |||||||||||||||||
| IDP02472 | 1 | YPO3785 | 16123919 | hypothetical protein YPO3785 [Yersinia p... | 276 | N/A | June 2008 | 1YWF | 27.2% | Yersinia pestis | Energy metabolism | Sugars | ||||||||||||||||||
| IDP00415 | 1 | YPO3767 | 16123903 | fadA | 3-ketoacyl-CoA thiolase | 387 | Virulence Associated Factor | March 2008 | 1WDK | 64.6% | Yersinia pestis | Cellular processes | Detoxification | |||||||||||||||||
| IDP00503 | 1 | YPO3766 | 16123902 | fadB | multifunctional fatty acid oxidation com... | 729 | Virulence Associated Factor | March 2008 | 1WDK | 55.1% | Yersinia pestis | Cellular processes | Detoxification | |||||||||||||||||
| IDP00595 | 1 | YPO3760 | 16123897 | murB | UDP-N-acetylenolpyruvoylglucosamine redu... | 345 | Drug Target Function | March 2008 | 1MBB | 60.9% | Yersinia pestis | Cell envelope | Biosynthesis and degradation of murein sacculus and peptidoglycan | |||||||||||||||||
| IDP02638 | 1 | YPO3725 | 16123862 | aceA | isocitrate lyase [Yersinia pestis CO92] | 435 | N/A | June 2008 | 1IGW | 84.4% | Yersinia pestis | Energy metabolism | TCA cycle | |||||||||||||||||
| IDP02636 | 1 | YPO3722 | 16123860 | metH | B12-dependent methionine synthase [Yersi... | 1231 | N/A | June 2008 | 1K7Y | 40.1% | Yersinia pestis | Amino acid biosynthesis | Aspartate family | |||||||||||||||||
| IDP00514 | 1 | YPO3721 | 16123859 | hemolysin | 1635 | Conserved Gene / Pathway | March 2008 | 1RWR | 5.4% | Yersinia pestis | Cellular processes | Toxin production and resistance | ||||||||||||||||||
| IDP00431 | 1 | YPO3720 | 16123858 | shlB | hemolysin activator protein | 561 | Virulence Associated Factor | March 2008 | 2QDZ | 25% | Yersinia pestis | Cellular processes | Toxin production and resistance | |||||||||||||||||
| IDP02053 | 1 | YPO3699 | 16123838 | hypothetical protein YPO3699 [Yersinia p... | 158 | N/A | June 2008 | Yersinia pestis | Cell envelope | Other | ||||||||||||||||||||
| IDP01778 | 1 | YPO3689 | 16123828 | putative ribonuclease [Yersinia pestis C... | 152 | N/A | June 2008 | 1BNE | 42.1% | Yersinia pestis | Transcription | Degradation of RNA | ||||||||||||||||||
| IDP00233 | 1 | YPO3676 | 16123819 | - | putative phage-related protein | 133 | Virulence | October 2007 | 2VO9 | 25.6% | Yersinia pestis | Hypothetical proteins | Conserved | |||||||||||||||||
| IDP00513 | 1 | YPO3674 | 16123817 | putative insecticidal toxin | 1011 | Conserved Gene / Pathway | March 2008 | Yersinia pestis | Cellular processes | Toxin production and resistance | ||||||||||||||||||||
| IDP02411 | 1 | YPO3640 | 16123782 | hypothetical protein YPO3640 [Yersinia p... | 448 | N/A | June 2008 | Yersinia pestis | Cell envelope | Other | ||||||||||||||||||||
| IDP01774 | 1 | YPO3639 | 16123781 | putative glutathione S-transferase YghU ... | 284 | N/A | June 2008 | 1G6W | 27.8% | Yersinia pestis | Central intermediary metabolism | Other | ||||||||||||||||||
| IDP01768 | 1 | YPO3633 | 16123775 | putative periplasmic binding protein [Ye... | 352 | N/A | June 2008 | 3D02 | 49.1% | Yersinia pestis | Transport and binding proteins | Amino acids, peptides and amines | ||||||||||||||||||
| IDP01763 | 1 | YPO3627 | 16123769 | ssuB | aliphatic sulfonates transport ATP-bindi... | 271 | N/A | June 2008 | 2IT1 | 35.4% | Yersinia pestis | Transport and binding proteins | Unknown substrate | |||||||||||||||||
| IDP01772 | 1 | YPO3599 | 16123741 | clpB2 | Clp ATPase [Yersinia pestis CO92] | 867 | N/A | June 2008 | 1QVR | 33.8% | Yersinia pestis | Protein fate | Degradation of proteins, peptides, and glycopeptides | |||||||||||||||||
| IDP02274 | 1 | YPO3578 | 16123722 | 3-deoxy-D-manno-octulosonate 8-phosphate... | 187 | N/A | June 2008 | 2R8E | 74.9% | Yersinia pestis | Hypothetical proteins | Conserved | ||||||||||||||||||
| IDP00510 | 1 | YPO3572 | 16123716 | hypothetical protein YPO3572 | 207 | Virulence Associated Factor | March 2008 | 2QGU | 30% | Yersinia pestis | Cell envelope | Other | ||||||||||||||||||
| IDP00594 | 1 | YPO3569 | 16123713 | murA | UDP-N-acetylglucosamine 1-carboxyvinyltr... | 420 | Conserved Gene / Pathway | March 2008 | 1NAW | 91.7% | Yersinia pestis | Cell envelope | Biosynthesis and degradation of murein sacculus and peptidoglycan | |||||||||||||||||
| IDP02413 | 1 | YPO3568 | 16123712 | degS | serine endoprotease [Yersinia pestis CO9... | 362 | N/A | June 2008 | 1SOT | 63% | Yersinia pestis | Protein fate | Degradation of proteins, peptides, and glycopeptides | |||||||||||||||||
| IDP0168 | ||||||||||||||||||||||||||||||