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| CSGID ID | Priority | Locus Tag | NCBI GI | Gene Name |
Common Name | Sequence Length |
Comment | Project | Homolog PDB ID |
Homolog Sequence Identity |
Target Organism | TIGR Main Role | TIGR Subrole | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| IDP00981 | 1 | STM2052 | 16765382 | pduQ | propanol dehydrogenase | 370 | Conserved Gene / Pathway | March 2008 | 1JPU | 33.5% | Salmonella typhimurium | Energy metabolism | Fermentation | |||||||||||||||||
| IDP00982 | 1 | STM2062 | 16765392 | dacD | D-alanyl-D-alanine carboxypeptidase | 390 | Drug Target Function | March 2008 | 1ES2 | 45.1% | Salmonella typhimurium | Cell envelope | Biosynthesis and degradation of murein sacculus and peptidoglycan | |||||||||||||||||
| IDP00983 | 1 | STM2064 | 16765394 | phsB | thiosulfate reductase electron transport... | 192 | Conserved Gene / Pathway | March 2008 | 1FRK | 37% | Salmonella typhimurium | Energy metabolism | Electron transport | |||||||||||||||||
| IDP00984 | 1 | STM2073 | 16765403 | hisC | histidinol-phosphate aminotransferase | 359 | Conserved Gene / Pathway | March 2008 | 1B5O | 88% | Salmonella typhimurium | Amino acid biosynthesis | Histidine family | |||||||||||||||||
| IDP00985 | 1 | STM2076 | 16765406 | hisA | 1-(5-phosphoribosyl)-5-[(5-phosphoribosy... | 245 | Conserved Gene / Pathway | March 2008 | 1GPW | 34.3% | Salmonella typhimurium | Amino acid biosynthesis | Histidine family | |||||||||||||||||
| IDP00986 | 1 | STM2106 | 16765436 | wcaI | predicted glycosyl transferase | 407 | Drug Target Function | March 2008 | Salmonella typhimurium | Cell envelope | Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides | |||||||||||||||||||
| IDP00987 | 1 | STM2147 | 16765476 | thiM | hydroxyethylthiazole kinase | 265 | Conserved Gene / Pathway | March 2008 | 1C3Q | 36.6% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Thiamine | |||||||||||||||||
| IDP00988 | 1 | STM2163 | 16765493 | yehX | putative ABC-type proline/glycine betain... | 315 | Conserved Gene / Pathway | March 2008 | 1B0U | 32.4% | Salmonella typhimurium | Transport and binding proteins | Other | |||||||||||||||||
| IDP00989 | 1 | STM2183 | 16765513 | cdd | cytidine deaminase | 294 | Conserved Gene / Pathway | March 2008 | 1AF2 | 87.4% | Salmonella typhimurium | Purines, pyrimidines, nucleosides, and nucleotides | Salvage of nucleosides and nucleotides | |||||||||||||||||
| IDP00990 | 1 | STM2193 | 16765523 | folE | GTP cyclohydrolase I | 222 | Conserved Gene / Pathway | March 2008 | 1A8R | 95.5% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Folic acid | |||||||||||||||||
| IDP00991 | 1 | STM2212 | 16765541 | yeiR | putative cobalamin biosynthetic protein ... | 328 | Conserved Gene / Pathway | March 2008 | 1NIJ | 18.9% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Heme, porphyrin, and cobalamin | |||||||||||||||||
| IDP00992 | 1 | STM2227 | 16765556 | yejL | putative cytoplasmic protein | 75 | Conserved Gene / Pathway | March 2008 | 2JPQ | 90.7% | Salmonella typhimurium | Protein synthesis | tRNA aminoacylation | |||||||||||||||||
| IDP00993 | 1 | STM2250 | 16765578 | ccmE | cytochrome c-type biogenesis protein Ccm... | 159 | Conserved Gene / Pathway | March 2008 | 1J6Q | 68.6% | Salmonella typhimurium | Transport and binding proteins | Amino acids, peptides and amines | |||||||||||||||||
| IDP00994 | 1 | STM2306 | 16765633 | menC | O-succinylbenzoate synthase | 320 | Conserved Gene / Pathway | March 2008 | 1CHR | 88.1% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Menaquinone and ubiquinone | |||||||||||||||||
| IDP00995 | 1 | STM2307 | 16765634 | menB | naphthoate synthase | 285 | Conserved Gene / Pathway | March 2008 | 1DCI | 66.3% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Menaquinone and ubiquinone | |||||||||||||||||
| IDP00996 | 1 | STM2310 | 16765637 | menF | menaquinone-specific isochorismate synth... | 431 | Drug Target Function | March 2008 | 1I1Q | 78.7% | Salmonella typhimurium | Unclassified | Role category not yet assigned | |||||||||||||||||
| IDP00997 | 1 | STM2314 | 16765641 | putative chemotaxis signal transduction ... | 333 | Conserved Gene / Pathway | March 2008 | 1I3C | 12% | Salmonella typhimurium | Cellular processes | Chemotaxis and motility | ||||||||||||||||||
| IDP00998 | 1 | STM2369 | 16765696 | usg | hypothetical protein STM2369 | 337 | Conserved Gene / Pathway | March 2008 | 1YS4 | 46.6% | Salmonella typhimurium | Amino acid biosynthesis | Aspartate family | |||||||||||||||||
| IDP00999 | 1 | STM2388 | 16765715 | fadJ | multifunctional fatty acid oxidation com... | 715 | Conserved Gene / Pathway | March 2008 | 1DCI | 35.8% | Salmonella typhimurium | Fatty acid and phospholipid metabolism | Degradation | |||||||||||||||||
| IDP01000 | 1 | STM2389 | 16765716 | fadI | 3-ketoacyl-CoA thiolase | 436 | Conserved Gene / Pathway | March 2008 | 1AFW | 35.8% | Salmonella typhimurium | Fatty acid and phospholipid metabolism | Degradation | |||||||||||||||||
| IDP01001 | 1 | STM2405 | 16765731 | indolepyruvate decarboxylase | 550 | Conserved Gene / Pathway | March 2008 | 1BFD | 66.7% | Salmonella typhimurium | Unknown function | Enzymes of unknown specificity | ||||||||||||||||||
| IDP01002 | 1 | STM2406 | 16765732 | putative oxidoreductase | 332 | Essential Gene | March 2008 | 1EXB | 37% | Salmonella typhimurium | Transport and binding proteins | Cations and iron carrying compounds | ||||||||||||||||||
| IDP01003 | 1 | STM2479 | 16765799 | aegA | putative oxidoreductase Fe-S binding sub... | 653 | Conserved Gene / Pathway | March 2008 | 1CJC | 29.2% | Salmonella typhimurium | Central intermediary metabolism | Other | |||||||||||||||||
| IDP01004 | 1 | STM2489 | 16765809 | dapA | dihydrodipicolinate synthase | 292 | Conserved Gene / Pathway | March 2008 | 1DHP | 91.1% | Salmonella typhimurium | Amino acid biosynthesis | Aspartate family | |||||||||||||||||
| IDP01005 | 1 | STM2511 | 16765831 | guaB | inositol-5-monophosphate dehydrogenase | 488 | Conserved Gene / Pathway | March 2008 | 1AK5 | 55.7% | Salmonella typhimurium | Purines, pyrimidines, nucleosides, and nucleotides | Purine ribonucleotide biosynthesis | |||||||||||||||||
| IDP01006 | 1 | STM2529 | 16765849 | putative anaerobic dimethylsulfoxide red... | 209 | Conserved Gene / Pathway | March 2008 | 1BC6 | 32.1% | Salmonella typhimurium | Energy metabolism | Anaerobic | ||||||||||||||||||
| IDP01007 | 1 | STM2531 | 16765851 | pbpC | penicillin-binding protein 1C | 771 | Drug Target Function | March 2008 | 2BG1 | 21.5% | Salmonella typhimurium | Cell envelope | Biosynthesis and degradation of murein sacculus and peptidoglycan | |||||||||||||||||
| IDP01008 | 1 | STM2533 | 16765853 | sseA | 3-mercaptopyruvate sulfurtransferase | 280 | Conserved Gene / Pathway | March 2008 | 1BOH | 79.6% | Salmonella typhimurium | Cellular processes | Detoxification | |||||||||||||||||
| IDP01009 | 1 | STM2535 | 16765855 | sseB | enhanced serine sensitivity protein | 261 | Conserved Gene / Pathway | March 2008 | Salmonella typhimurium | Protein fate | Protein and peptide secretion and trafficking | |||||||||||||||||||
| IDP01010 | 1 | STM2539 | 16765859 | hscA | chaperone protein HscA | 616 | Conserved Gene / Pathway | March 2008 | 1ATR | 39.1% | Salmonella typhimurium | Protein fate | Protein folding and stabilization | |||||||||||||||||
| IDP01011 | 1 | STM2555 | 16765875 | glyA | serine hydroxymethyltransferase | 417 | Conserved Gene / Pathway | March 2008 | 1BJ4 | 93.3% | Salmonella typhimurium | Amino acid biosynthesis | Serine family | |||||||||||||||||
| IDP01012 | 1 | STM2578 | 16765898 | pdxJ | pyridoxal phosphate biosynthetic protein... | 243 | Conserved Gene / Pathway | March 2008 | 1HO1 | 93.8% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Pyridoxine | |||||||||||||||||
| IDP01013 | 1 | STM2670 | 16765985 | aroF | phospho-2-dehydro-3-deoxyheptonate aldol... | 356 | Conserved Gene / Pathway | March 2008 | 1GG1 | 51.4% | Salmonella typhimurium | Amino acid biosynthesis | Aromatic amino acid family | |||||||||||||||||
| IDP01014 | 1 | STM2780 | 16766091 | pipB2 | secreted effector protein | 350 | Virulence Associated Factor | March 2008 | 2BM4 | 20% | Salmonella typhimurium | Unknown function | General | |||||||||||||||||
| IDP01015 | 1 | STM2791 | 16766102 | gabD | succinate-semialdehyde dehydrogenase I | 482 | Conserved Gene / Pathway | March 2008 | 1A4S | 38.4% | Salmonella typhimurium | Central intermediary metabolism | Other | |||||||||||||||||
| IDP01016 | 1 | STM2792 | 16766103 | gabT | 4-aminobutyrate aminotransferase | 427 | Conserved Gene / Pathway | March 2008 | 1D7R | 88.3% | Salmonella typhimurium | Central intermediary metabolism | Other | |||||||||||||||||
| IDP01017 | 1 | STM2854 | 16766160 | hypA | hydrogenase nickel incorporation protein... | 118 | Conserved Gene / Pathway | March 2008 | Salmonella typhimurium | Protein fate | Protein modification and repair | |||||||||||||||||||
| IDP01018 | 1 | STM2894 | 16766200 | invC | ATP synthase SpaL | 431 | Conserved Gene / Pathway | March 2008 | 1BMF | 38.7% | Salmonella typhimurium | Transport and binding proteins | Other | |||||||||||||||||
| IDP01019 | 1 | STM0228 | 16763618 | lpxA | UDP-N-acetylglucosamine acyltransferase ... | 262 | Essential Gene | March 2008 | 1J2Z | 93.5% | Salmonella typhimurium | Cell envelope | Biosynthesis and degradation of murein sacculus and peptidoglycan | |||||||||||||||||
| IDP01020 | 1 | STM2110 | 16765440 | wcaF | putative colanic acid biosynthesis acety... | 184 | Essential Gene | March 2008 | 1KHR | 25% | Salmonella typhimurium | Cellular processes | Toxin production and resistance | |||||||||||||||||
| IDP01021 | 1 | STM0044 | 16763434 | yaaY | putative cytoplasmic protein | 71 | Conserved Gene / Pathway | March 2008 | Salmonella typhimurium | Protein synthesis | tRNA aminoacylation | |||||||||||||||||||
| IDP01022 | 1 | STM0048 | 16763438 | slpA | FKBP-type peptidyl-prolyl cis-trans isom... | 149 | Conserved Gene / Pathway | March 2008 | 1A7X | 24.8% | Salmonella typhimurium | Protein synthesis | Translation factors | |||||||||||||||||
| IDP01023 | 1 | STM1051 | 16764411 | sseI | secreted effector protein [Phage Gifsy-2... | 322 | Virulence Associated Factor | March 2008 | Salmonella typhimurium | Unknown function | General | |||||||||||||||||||
| IDP01024 | 1 | STM1172 | 16764528 | flgM | anti-sigma28 factor FlgM | 97 | Conserved Gene / Pathway | March 2008 | Salmonella typhimurium | Cell envelope | Surface structures | |||||||||||||||||||
| IDP01025 | 1 | STM1196 | 16764551 | acpP | acyl carrier protein | 78 | Conserved Gene / Pathway | March 2008 | 1ACP | 100% | Salmonella typhimurium | Fatty acid and phospholipid metabolism | Biosynthesis | |||||||||||||||||
| IDP01026 | 1 | STM1267 | 16764618 | putative cytoplasmic protein | 82 | Conserved Gene / Pathway | March 2008 | 2OXL | 32.9% | Salmonella typhimurium | Protein synthesis | tRNA aminoacylation | ||||||||||||||||||
| IDP01027 | 1 | STM1346 | 16764697 | ydiE | hypothetical protein STM1346 | 63 | Conserved Gene / Pathway | March 2008 | Salmonella typhimurium | Protein synthesis | tRNA aminoacylation | |||||||||||||||||||
| IDP01028 | 1 | STM1707 | 16765051 | pyrF | orotidine 5'-phosphate decarboxylase | 245 | Essential Gene | March 2008 | 1DBT | 88.2% | Salmonella typhimurium | Purines, pyrimidines, nucleosides, and nucleotides | Pyrimidine ribonucleotide biosynthesis | |||||||||||||||||
| IDP01029 | 1 | STM1916 | 16765258 | cheY | chemotaxis regulator transmitting signal... | 129 | Conserved Gene / Pathway | March 2008 | 1A04 | 100% | Salmonella typhimurium | Cellular processes | Other | |||||||||||||||||
| IDP01030 | 1 | STM2107 | 16765437 | wcaH | GDP-mannose mannosyl hydrolase | 167 | Conserved Gene / Pathway | March 2008 | 1RYA | 65.9% | Salmonella typhimurium | Cell envelope | Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides | |||||||||||||||||
| IDP01031 | 1 | STM3497 | 16766785 | yrfH | ribosome-associated heat shock protein H... | 133 | Conserved Gene / Pathway | March 2008 | 1DM9 | 95.5% | Salmonella typhimurium | Protein synthesis | Other | |||||||||||||||||
| IDP01032 | 1 | STM3507 | 16766795 | yhgG | putative cytoplasmic protein | 78 | Conserved Gene / Pathway | March 2008 | 1XN7 | 89.7% | Salmonella typhimurium | Protein synthesis | tRNA aminoacylation | |||||||||||||||||
| IDP01033 | 1 | STM3815 | 16767100 | ccmE | cytochrome c-type biogenesis protein Ccm... | 159 | Conserved Gene / Pathway | March 2008 | 1J6Q | 68.6% | Salmonella typhimurium | Transport and binding proteins | Amino acids, peptides and amines | |||||||||||||||||
| IDP01034 | 1 | STM4089 | 16767355 | menG | ribonuclease activity regulator protein ... | 161 | Conserved Gene / Pathway | March 2008 | 1J3L | 97.5% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Menaquinone and ubiquinone | |||||||||||||||||
| IDP01035 | 1 | STM4146 | 16767400 | tuf | elongation factor Tu | 394 | Conserved Gene / Pathway | March 2008 | 1AIP | 99.5% | Salmonella typhimurium | Protein synthesis | Translation factors | |||||||||||||||||
| IDP01036 | 1 | STM2897 | 16766203 | invE | invasion protein | 372 | Conserved Gene / Pathway | March 2008 | 2VIX | 26.1% | Salmonella typhimurium | Cellular processes | Pathogenesis | |||||||||||||||||
| IDP01037 | 1 | STM2927 | 16766233 | surE | stationary phase survival protein SurE | 253 | Conserved Gene / Pathway | March 2008 | 1ILV | 42.7% | Salmonella typhimurium | Cellular processes | Adaptations to atypical conditions | |||||||||||||||||
| IDP01038 | 1 | STM2929 | 16766235 | ispF | 2-C-methyl-D-erythritol 2,4-cyclodiphosp... | 159 | Drug Target Function | March 2008 | 1GX1 | 98.1% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Other | |||||||||||||||||
| IDP01039 | 1 | STM2934 | 16766240 | cysN | sulfate adenylyltransferase subunit 1 | 479 | Conserved Gene / Pathway | March 2008 | 1AIP | 52.4% | Salmonella typhimurium | Central intermediary metabolism | Sulfur metabolism | |||||||||||||||||
| IDP01040 | 1 | STM2935 | 16766241 | cysD | sulfate adenylyltransferase subunit 2 | 302 | Conserved Gene / Pathway | March 2008 | 1SUR | 75.5% | Salmonella typhimurium | Central intermediary metabolism | Sulfur metabolism | |||||||||||||||||
| IDP01041 | 1 | STM2971 | 16766276 | sdaB | L-serine dehydratase/L-threonine deamina... | 455 | Conserved Gene / Pathway | March 2008 | 2IAF | 16% | Salmonella typhimurium | Energy metabolism | Amino acids and amines | |||||||||||||||||
| IDP01042 | 1 | STM2973 | 16766278 | fucO | L-1,2-propanediol oxidoreductase | 382 | Conserved Gene / Pathway | March 2008 | 1O2D | 91.1% | Salmonella typhimurium | Energy metabolism | Fermentation | |||||||||||||||||
| IDP01043 | 1 | STM2985 | 16766289 | ygdK | putative FeS center assembly protein | 147 | Conserved Gene / Pathway | March 2008 | 1MZG | 86.4% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Other | |||||||||||||||||
| IDP01044 | 1 | STM3070 | 16766371 | epd | D-erythrose 4-phosphate dehydrogenase | 348 | Conserved Gene / Pathway | March 2008 | 1A7K | 47.1% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Pyridoxine | |||||||||||||||||
| IDP01045 | 1 | STM3114 | 16766415 | speC | ornithine decarboxylase isozyme | 711 | Conserved Gene / Pathway | March 2008 | 1C4K | 54.3% | Salmonella typhimurium | Central intermediary metabolism | Polyamine biosynthesis | |||||||||||||||||
| IDP01046 | 1 | STM3138 | 16766438 | putative methyl-accepting chemotaxis pro... | 352 | Conserved Gene / Pathway | March 2008 | 1QU7 | 16.8% | Salmonella typhimurium | Cellular processes | Other | ||||||||||||||||||
| IDP01047 | 1 | STM3152 | 16766452 | putative methyl-accepting chemotaxis pro... | 547 | Conserved Gene / Pathway | March 2008 | 1QU7 | 28% | Salmonella typhimurium | Cellular processes | Chemotaxis and motility | ||||||||||||||||||
| IDP01048 | 1 | STM3157 | 16766457 | yghA | oxidoreductase | 294 | Conserved Gene / Pathway | March 2008 | 1AE1 | 29.6% | Salmonella typhimurium | Unknown function | Enzymes of unknown specificity | |||||||||||||||||
| IDP01049 | 1 | STM3183 | 16766483 | icc | cyclic 3',5'-adenosine monophosphate pho... | 275 | Conserved Gene / Pathway | March 2008 | 2DXL | 25.1% | Salmonella typhimurium | Central intermediary metabolism | Other | |||||||||||||||||
| IDP01050 | 1 | STM3201 | 16766501 | glnE | bifunctional glutamine-synthetase adenyl... | 947 | Conserved Gene / Pathway | March 2008 | 1V4A | 40% | Salmonella typhimurium | Protein synthesis | Translation factors | |||||||||||||||||
| IDP01051 | 1 | STM3219 | 16766518 | fadH | 2,4-dieonyl-CoA reductase | 672 | Drug Target Function | March 2008 | 1BWK | 85.6% | Salmonella typhimurium | Fatty acid and phospholipid metabolism | Degradation | |||||||||||||||||
| IDP01052 | 1 | STM3324 | 16766619 | ptsO | phosphohistidinoprotein-hexose phosphotr... | 90 | Conserved Gene / Pathway | March 2008 | 1CM2 | 34.4% | Salmonella typhimurium | Transport and binding proteins | Carbohydrates, organic alcohols, and acids | |||||||||||||||||
| IDP01053 | 1 | STM3330 | 16766625 | gltB | glutamate synthase subunit alpha | 1486 | Conserved Gene / Pathway | March 2008 | 1EA0 | 45.8% | Salmonella typhimurium | Central intermediary metabolism | Other | |||||||||||||||||
| IDP01054 | 1 | STM3363 | 16766658 | yhcO | putative cytoplasmic protein | 90 | Conserved Gene / Pathway | March 2008 | 2CX6 | 76.7% | Salmonella typhimurium | Protein synthesis | tRNA aminoacylation | |||||||||||||||||
| IDP01055 | 1 | STM3371 | 16766666 | maf | Maf-like protein | 197 | Conserved Gene / Pathway | March 2008 | 1EX2 | 43.7% | Salmonella typhimurium | Cellular processes | Cell division | |||||||||||||||||