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| CSGID ID | Priority | Locus Tag | NCBI GI | Gene Name |
Common Name | Sequence Length |
Comment | Project | Homolog PDB ID |
Homolog Sequence Identity |
Target Organism | TIGR Main Role | TIGR Subrole | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| IDP00993 | 1 | STM2250 | 16765578 | ccmE | cytochrome c-type biogenesis protein Ccm... | 159 | Conserved Gene / Pathway | March 2008 | 1SR3 | 68.6% | Salmonella typhimurium | Transport and binding proteins | Amino acids, peptides and amines | |||||||||||||||||
| IDP01044 | 1 | STM3070 | 16766371 | epd | D-erythrose 4-phosphate dehydrogenase | 348 | Conserved Gene / Pathway | March 2008 | 1OBF | 47.1% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Pyridoxine | |||||||||||||||||
| IDP00990 | 1 | STM2193 | 16765523 | folE | GTP cyclohydrolase I | 222 | Conserved Gene / Pathway | March 2008 | 1FBX | 95.5% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Folic acid | |||||||||||||||||
| IDP00941 | 1 | STM0846 | 16764208 | moeA | molybdopterin biosynthesis protein MoeA ... | 413 | Conserved Gene / Pathway | March 2008 | 1FC5 | 87.2% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Molybdopterin | |||||||||||||||||
| IDP01033 | 1 | STM3815 | 16767100 | ccmE | cytochrome c-type biogenesis protein Ccm... | 159 | Conserved Gene / Pathway | March 2008 | 1SR3 | 68.6% | Salmonella typhimurium | Transport and binding proteins | Amino acids, peptides and amines | |||||||||||||||||
| IDP00965 | 1 | STM1463 | 16764811 | add | adenosine deaminase | 333 | Conserved Gene / Pathway | March 2008 | 1NDV | 35.1% | Salmonella typhimurium | Purines, pyrimidines, nucleosides, and nucleotides | Salvage of nucleosides and nucleotides | |||||||||||||||||
| IDP01081 | 1 | STM4267 | 16767517 | putative glutathione S-transferase | 222 | Conserved Gene / Pathway | March 2008 | 2C3N | 21.6% | Salmonella typhimurium | Cellular processes | Detoxification | ||||||||||||||||||
| IDP00862 | 1 | STM2251 | 16765579 | ccmD | heme exporter protein C | 70 | Conserved Gene / Pathway | March 2008 | Salmonella typhimurium | Energy metabolism | Electron transport | |||||||||||||||||||
| IDP00969 | 1 | STM1597 | 161353598 | ydcW | putative aldehyde dehydrogenase | 474 | Conserved Gene / Pathway | March 2008 | 1WNB | 83.5% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Other | |||||||||||||||||
| IDP00997 | 1 | STM2314 | 16765641 | putative chemotaxis signal transduction ... | 333 | Conserved Gene / Pathway | March 2008 | 1K68 | 12% | Salmonella typhimurium | Cellular processes | Chemotaxis and motility | ||||||||||||||||||
| IDP00936 | 1 | STM0793 | 16764156 | bioA | adenosylmethionine--8-amino-7-oxononanoa... | 429 | Conserved Gene / Pathway | March 2008 | 1MLY | 86.2% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Biotin | |||||||||||||||||
| IDP01029 | 1 | STM1916 | 16765258 | cheY | chemotaxis regulator transmitting signal... | 129 | Conserved Gene / Pathway | March 2008 | 2FKA | 100% | Salmonella typhimurium | Cellular processes | Other | |||||||||||||||||
| IDP00880 | 1 | STM0534 | 16763914 | purE | phosphoribosylaminoimidazole carboxylase... | 169 | Conserved Gene / Pathway | March 2008 | 1QCZ | 95.3% | Salmonella typhimurium | Purines, pyrimidines, nucleosides, and nucleotides | Purine ribonucleotide biosynthesis | |||||||||||||||||
| IDP00935 | 1 | STM0783 | 16764147 | modC | molybdate transporter ATP-binding protei... | 352 | Conserved Gene / Pathway | March 2008 | 3D31 | 29.5% | Salmonella typhimurium | Transport and binding proteins | Anions | |||||||||||||||||
| IDP00895 | 1 | STM1165 | 16764521 | grxB | glutaredoxin 2 | 215 | Conserved Gene / Pathway | March 2008 | 1G7O | 86% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Glutathione and analogs | |||||||||||||||||
| IDP00875 | 1 | STM1374 | 16764724 | ynhA | cysteine desufuration protein SufE | 138 | Conserved Gene / Pathway | March 2008 | 1MZG | 87.7% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Other | |||||||||||||||||
| IDP00853 | 1 | STM0359 | 16763739 | putative cytoplasmic protein | 33 | Conserved Gene / Pathway | March 2008 | Salmonella typhimurium | Protein synthesis | tRNA aminoacylation | ||||||||||||||||||||
| IDP00995 | 1 | STM2307 | 16765634 | menB | naphthoate synthase | 285 | Conserved Gene / Pathway | March 2008 | 2IEX | 66.3% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Menaquinone and ubiquinone | |||||||||||||||||
| IDP01003 | 1 | STM2479 | 16765799 | aegA | putative oxidoreductase Fe-S binding sub... | 653 | Conserved Gene / Pathway | March 2008 | 2VDC | 29.2% | Salmonella typhimurium | Central intermediary metabolism | Other | |||||||||||||||||
| IDP00964 | 1 | STM1439 | 16764787 | ydhF | putative aldo/keto reductase | 298 | Conserved Gene / Pathway | March 2008 | 1OG6 | 88.9% | Salmonella typhimurium | Unknown function | General | |||||||||||||||||
| IDP00983 | 1 | STM2064 | 16765394 | phsB | thiosulfate reductase electron transport... | 192 | Conserved Gene / Pathway | March 2008 | 2VPW | 37% | Salmonella typhimurium | Energy metabolism | Electron transport | |||||||||||||||||
| IDP01011 | 1 | STM2555 | 16765875 | glyA | serine hydroxymethyltransferase | 417 | Conserved Gene / Pathway | March 2008 | 1DFO | 93.3% | Salmonella typhimurium | Amino acid biosynthesis | Serine family | |||||||||||||||||
| IDP00884 | 1 | STM1925 | 16765267 | flhD | transcriptional activator FlhD | 116 | Conserved Gene / Pathway | March 2008 | 1G8E | 89.7% | Salmonella typhimurium | Cell envelope | Surface structures | |||||||||||||||||
| IDP00918 | 1 | STM0372 | 16763752 | hemB | delta-aminolevulinic acid dehydratase | 324 | Conserved Gene / Pathway | March 2008 | 1I8J | 93.5% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Heme, porphyrin, and cobalamin | |||||||||||||||||
| IDP00987 | 1 | STM2147 | 16765476 | thiM | hydroxyethylthiazole kinase | 265 | Conserved Gene / Pathway | March 2008 | 1C3Q | 36.6% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Thiamine | |||||||||||||||||
| IDP01030 | 1 | STM2107 | 16765437 | wcaH | GDP-mannose mannosyl hydrolase | 167 | Conserved Gene / Pathway | March 2008 | 2I8T | 65.9% | Salmonella typhimurium | Cell envelope | Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides | |||||||||||||||||
| IDP01039 | 1 | STM2934 | 16766240 | cysN | sulfate adenylyltransferase subunit 1 | 479 | Conserved Gene / Pathway | March 2008 | 1ZUN | 52.4% | Salmonella typhimurium | Central intermediary metabolism | Sulfur metabolism | |||||||||||||||||
| IDP01043 | 1 | STM2985 | 16766289 | ygdK | putative FeS center assembly protein | 147 | Conserved Gene / Pathway | March 2008 | 1NI7 | 86.4% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Other | |||||||||||||||||
| IDP00943 | 1 | STM0862 | 16764224 | yliJ | putative glutathione S-transferase | 208 | Conserved Gene / Pathway | March 2008 | 1AW9 | 28.8% | Salmonella typhimurium | Cellular processes | Detoxification | |||||||||||||||||
| IDP01027 | 1 | STM1346 | 16764697 | ydiE | hypothetical protein STM1346 | 63 | Conserved Gene / Pathway | March 2008 | Salmonella typhimurium | Protein synthesis | tRNA aminoacylation | |||||||||||||||||||
| IDP01058 | 1 | STM3486 | 16766774 | aroB | 3-dehydroquinate synthase | 362 | Conserved Gene / Pathway | March 2008 | 1DQS | 39.2% | Salmonella typhimurium | Amino acid biosynthesis | Aromatic amino acid family | |||||||||||||||||
| IDP01063 | 1 | STM3702 | 16766987 | grxC | glutaredoxin 3 | 83 | Conserved Gene / Pathway | March 2008 | 1FOV | 86.7% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Glutathione and analogs | |||||||||||||||||
| IDP01001 | 1 | STM2405 | 16765731 | indolepyruvate decarboxylase | 550 | Conserved Gene / Pathway | March 2008 | 1OVM | 66.7% | Salmonella typhimurium | Unknown function | Enzymes of unknown specificity | ||||||||||||||||||
| IDP00988 | 1 | STM2163 | 16765493 | yehX | putative ABC-type proline/glycine betain... | 315 | Conserved Gene / Pathway | March 2008 | 1V43 | 32.4% | Salmonella typhimurium | Transport and binding proteins | Other | |||||||||||||||||
| IDP00864 | 1 | STM1268 | 16764619 | putative cytoplasmic protein | 49 | Conserved Gene / Pathway | March 2008 | Salmonella typhimurium | Protein synthesis | tRNA aminoacylation | ||||||||||||||||||||
| IDP00861 | 1 | STM2117 | 16765447 | wzb | tyrosine phosphatase | 149 | Conserved Gene / Pathway | March 2008 | 2FEK | 81.9% | Salmonella typhimurium | Central intermediary metabolism | Other | |||||||||||||||||
| IDP00868 | 1 | STM4171 | 16767425 | yjaH | putative inner membrane protein | 230 | Conserved Gene / Pathway | March 2008 | Salmonella typhimurium | Cell envelope | Other | |||||||||||||||||||
| IDP01084 | 1 | STM4377 | 161353573 | aidB | putative acyl-CoA dehydrogenase | 546 | Conserved Gene / Pathway | March 2008 | 3DJL | 84.6% | Salmonella typhimurium | Fatty acid and phospholipid metabolism | Degradation | |||||||||||||||||
| IDP01042 | 1 | STM2973 | 16766278 | fucO | L-1,2-propanediol oxidoreductase | 382 | Conserved Gene / Pathway | March 2008 | 1RRM | 91.1% | Salmonella typhimurium | Energy metabolism | Fermentation | |||||||||||||||||
| IDP01026 | 1 | STM1267 | 16764618 | putative cytoplasmic protein | 82 | Conserved Gene / Pathway | March 2008 | 2OXL | 32.9% | Salmonella typhimurium | Protein synthesis | tRNA aminoacylation | ||||||||||||||||||
| IDP00416 | 1 | YPO1212 | 16121503 | 2Fe-2S ferredoxin YfaE | 85 | Conserved Gene / Pathway | March 2008 | 1FXI | 32.9% | Yersinia pestis | Energy metabolism | Electron transport | ||||||||||||||||||
| IDP00939 | 1 | STM0828 | 16764190 | glnQ | glutamine ABC transporter ATP-binding pr... | 240 | Conserved Gene / Pathway | March 2008 | 1B0U | 55.4% | Salmonella typhimurium | Transport and binding proteins | Amino acids, peptides and amines | |||||||||||||||||
| IDP01032 | 1 | STM3507 | 16766795 | yhgG | putative cytoplasmic protein | 78 | Conserved Gene / Pathway | March 2008 | 1XN7 | 89.7% | Salmonella typhimurium | Protein synthesis | tRNA aminoacylation | |||||||||||||||||
| IDP01008 | 1 | STM2533 | 16765853 | sseA | 3-mercaptopyruvate sulfurtransferase | 280 | Conserved Gene / Pathway | March 2008 | 1URH | 79.6% | Salmonella typhimurium | Cellular processes | Detoxification | |||||||||||||||||
| IDP00909 | 1 | STM0171 | 16763561 | yadF | carbonic anhydrase | 220 | Conserved Gene / Pathway | March 2008 | 1I6O | 90% | Salmonella typhimurium | Central intermediary metabolism | Other | |||||||||||||||||
| IDP00892 | 1 | STM3881 | 16767165 | rbsD | high-affinity D-ribose transport protein... | 139 | Conserved Gene / Pathway | March 2008 | 3DSA | 100% | Salmonella typhimurium | Transport and binding proteins | Carbohydrates, organic alcohols, and acids | |||||||||||||||||
| IDP00863 | 1 | STM2254 | 16765582 | ccmA | heme exporter protein | 205 | Conserved Gene / Pathway | March 2008 | 1Z47 | 32.7% | Salmonella typhimurium | Protein fate | Protein and peptide secretion and trafficking | |||||||||||||||||
| IDP00989 | 1 | STM2183 | 16765513 | cdd | cytidine deaminase | 294 | Conserved Gene / Pathway | March 2008 | 1AF2 | 87.4% | Salmonella typhimurium | Purines, pyrimidines, nucleosides, and nucleotides | Salvage of nucleosides and nucleotides | |||||||||||||||||
| IDP00878 | 1 | STM4306 | 16767556 | putative anaerobic dimethylsulfoxide red... | 208 | Conserved Gene / Pathway | March 2008 | 2VPW | 29.3% | Salmonella typhimurium | Energy metabolism | Anaerobic | ||||||||||||||||||
| IDP00957 | 1 | STM1202 | 16764557 | ycfH | predicted metallodependent hydrolase | 265 | Conserved Gene / Pathway | March 2008 | 1YIX | 92.8% | Salmonella typhimurium | Unknown function | Enzymes of unknown specificity | |||||||||||||||||
| IDP01052 | 1 | STM3324 | 16766619 | ptsO | phosphohistidinoprotein-hexose phosphotr... | 90 | Conserved Gene / Pathway | March 2008 | 1JEM | 34.4% | Salmonella typhimurium | Transport and binding proteins | Carbohydrates, organic alcohols, and acids | |||||||||||||||||
| IDP00913 | 1 | STM0219 | 16763609 | frr | ribosome recycling factor | 185 | Conserved Gene / Pathway | March 2008 | 1EK8 | 94.1% | Salmonella typhimurium | Protein synthesis | Translation factors | |||||||||||||||||
| IDP00999 | 1 | STM2388 | 16765715 | fadJ | multifunctional fatty acid oxidation com... | 715 | Conserved Gene / Pathway | March 2008 | 1WDK | 35.8% | Salmonella typhimurium | Fatty acid and phospholipid metabolism | Degradation | |||||||||||||||||
| IDP00991 | 1 | STM2212 | 16765541 | yeiR | putative cobalamin biosynthetic protein ... | 328 | Conserved Gene / Pathway | March 2008 | 1NIJ | 18.9% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Heme, porphyrin, and cobalamin | |||||||||||||||||
| IDP00973 | 1 | STM1756 | 16765100 | purU | formyltetrahydrofolate deformylase | 280 | Conserved Gene / Pathway | March 2008 | 1MEJ | 20.7% | Salmonella typhimurium | Purines, pyrimidines, nucleosides, and nucleotides | Purine ribonucleotide biosynthesis | |||||||||||||||||
| IDP00914 | 1 | STM0220 | 16763610 | dxr | 1-deoxy-D-xylulose 5-phosphate reductois... | 398 | Conserved Gene / Pathway | March 2008 | 1K5H | 88.7% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Other | |||||||||||||||||
| IDP01047 | 1 | STM3152 | 16766452 | putative methyl-accepting chemotaxis pro... | 547 | Conserved Gene / Pathway | March 2008 | 1QU7 | 28% | Salmonella typhimurium | Cellular processes | Chemotaxis and motility | ||||||||||||||||||
| IDP00408 | 1 | YPO2735 | 16122939 | ccmB | heme exporter protein B | 219 | Conserved Gene / Pathway | March 2008 | Yersinia pestis | Protein fate | Protein and peptide secretion and trafficking | |||||||||||||||||||
| IDP00502 | 1 | YPO2045 | 16122284 | putative hemolysin | 1576 | Conserved Gene / Pathway | March 2008 | 1RWR | 5.5% | Yersinia pestis | Cellular processes | Toxin production and resistance | ||||||||||||||||||
| IDP01497 | 1 | VCA0820 | 15601575 | groEL | chaperonin GroEL | 530 | Conserved Gene / Pathway | March 2008 | 1AON | 74.2% | Vibrio cholerae | Protein fate | Protein folding and stabilization | |||||||||||||||||
| IDP00855 | 1 | STM0146 | 16763536 | ampD | N-acetyl-anhydromuranmyl-L-alanine amida... | 187 | Conserved Gene / Pathway | March 2008 | 1J3G | 89.8% | Salmonella typhimurium | Cellular processes | Toxin production and resistance | |||||||||||||||||
| IDP01345 | 1 | VC0824 | 15640841 | tagD protein | 164 | Conserved Gene / Pathway | March 2008 | 1QXH | 50% | Vibrio cholerae | Cellular processes | Pathogenesis | ||||||||||||||||||
| IDP00998 | 1 | STM2369 | 16765696 | usg | hypothetical protein STM2369 | 337 | Conserved Gene / Pathway | March 2008 | 2QZ9 | 46.6% | Salmonella typhimurium | Amino acid biosynthesis | Aspartate family | |||||||||||||||||
| IDP00952 | 1 | STM1176 | 16764532 | flgD | flagellar basal body rod modification pr... | 232 | Conserved Gene / Pathway | March 2008 | Salmonella typhimurium | Cell envelope | Surface structures | |||||||||||||||||||
| IDP01037 | 1 | STM2927 | 16766233 | surE | stationary phase survival protein SurE | 253 | Conserved Gene / Pathway | March 2008 | 2PHJ | 42.7% | Salmonella typhimurium | Cellular processes | Adaptations to atypical conditions | |||||||||||||||||
| IDP00436 | 1 | YPO3358 | 16123508 | surE | stationary phase survival protein SurE | 254 | Conserved Gene / Pathway | March 2008 | 2PHJ | 41.3% | Yersinia pestis | Cellular processes | Adaptations to atypical conditions | |||||||||||||||||
| IDP00440 | 1 | YPO2208 | 16122436 | trpE | anthranilate synthase component I | 521 | Conserved Gene / Pathway | March 2008 | 1I7Q | 79.7% | Yersinia pestis | Amino acid biosynthesis | Aromatic amino acid family | |||||||||||||||||
| IDP00549 | 1 | YPO3814 | 16123948 | ftsY | cell division protein | 541 | Conserved Gene / Pathway | March 2008 | 2QY9 | 49% | Yersinia pestis | Cellular processes | Cell division | |||||||||||||||||
| IDP00886 | 1 | STM2329 | 16765656 | putative cytoplasmic protein | 50 | Conserved Gene / Pathway | March 2008 | Salmonella typhimurium | Protein synthesis | tRNA aminoacylation | ||||||||||||||||||||
| IDP00859 | 1 | STM1770 | 16765111 | chaB | cation transport regulator | 76 | Conserved Gene / Pathway | March 2008 | 1SG7 | 81.6% | Salmonella typhimurium | Transport and binding proteins | Unknown substrate | |||||||||||||||||
| IDP01067 | 1 | STM3854 | 16767138 | pstB | phosphate transporter subunit | 257 | Conserved Gene / Pathway | March 2008 | 2OLJ | 36.2% | Salmonella typhimurium | Transport and binding proteins | Anions | |||||||||||||||||
| IDP01319 | 1 | VC0312 | 15640339 | fre | FMN reductase | 236 | Conserved Gene / Pathway | March 2008 | 1QFJ | 48.3% | Vibrio cholerae | Energy metabolism | Electron transport | |||||||||||||||||
| IDP00580 | 1 | YPO0059 | 16120412 | kbl | 2-amino-3-ketobutyrate coenzyme A ligase... | 403 | Conserved Gene / Pathway | March 2008 | 1FC4 | 82.9% | Yersinia pestis | Biosynthesis of cofactors, prosthetic groups, and carriers | Biotin | |||||||||||||||||
| IDP01066 | 1 | STM3819 | 16767104 | ccmA | heme exporter protein | 205 | Conserved Gene / Pathway | March 2008 | 1Z47 | 32.7% | Salmonella typhimurium | Protein fate | Protein and peptide secretion and traffick | |||||||||||||||||