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| CSGID ID | Priority | Locus Tag | NCBI GI | Gene Name |
Common Name | Sequence Length |
Comment | Project | Homolog PDB ID |
Homolog Sequence Identity |
Target Organism | TIGR Main Role | TIGR Subrole | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| IDP01046 | 1 | STM3138 | 16766438 | putative methyl-accepting chemotaxis pro... | 352 | Conserved Gene / Pathway | March 2008 | 1QU7 | 16.8% | Salmonella typhimurium | Cellular processes | Other | ||||||||||||||||||
| IDP01900 | 1 | STM0570 | 16763947 | apeE | outer membrane esterase [Salmonella typh... | 656 | N/A | June 2008 | Salmonella typhimurium | Unclassified | Role category not yet assigned | |||||||||||||||||||
| IDP00973 | 1 | STM1756 | 16765100 | purU | formyltetrahydrofolate deformylase | 280 | Conserved Gene / Pathway | March 2008 | 1MEJ | 20.7% | Salmonella typhimurium | Purines, pyrimidines, nucleosides, and nucleotides | Purine ribonucleotide biosynthesis | |||||||||||||||||
| IDP01855 | 1 | STM1162 | 16764518 | dinI | DNA damage-inducible protein I [Salmonel... | 81 | N/A | June 2008 | 1GHH | 85.2% | Salmonella typhimurium | Unknown function | General | |||||||||||||||||
| IDP00920 | 1 | STM0417 | 16763797 | ribH | riboflavin synthase subunit beta | 156 | Conserved Gene / Pathway | March 2008 | 1RVV | 51.9% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Riboflavin, FMN, and FAD | |||||||||||||||||
| IDP01894 | 1 | STM0564 | 16763941 | pyridine nucleotide-disulfide oxidoreduc... | 441 | N/A | June 2008 | 2EQ6 | 34.2% | Salmonella typhimurium | Unknown function | Enzymes of unknown specificity | ||||||||||||||||||
| IDP02695 | 1 | Cj0698 | 6968150 | Cj0693c | hypothetical protein Cj0693c [Campylobac... | 263 | N/A | June 2008 | 1WLG | 17.9% | Campylobacter jejuni | Unknown function | Enzymes of unknown specificity | |||||||||||||||||
| IDP01654 | 1 | STM1259 | 16764611 | putative ABC-type transport system ATPas... | 196 | N/A | June 2008 | 1Z47 | 31.6% | Salmonella typhimurium | Unclassified | Role category not yet assigned | ||||||||||||||||||
| IDP00905 | 1 | STM0126 | 16763516 | murD | UDP-N-acetylmuramoyl-L-alanyl-D-glutamat... | 438 | Essential Gene | March 2008 | 1E0D | 92.2% | Salmonella typhimurium | Cell envelope | Biosynthesis and degradation of murein sacculus and peptidoglycan | |||||||||||||||||
| IDP01530 | 1 | STM1524 | 16764869 | yneI | putative succinate-semialdehyde dehydrog... | 462 | Essential gene in Salmonella which is important in energy metabolism | June 2008 | 3EFV | 100% | Salmonella typhimurium | |||||||||||||||||||
| IDP01531 | 1 | SF4094 | 56384059 | sorC | probable sor-operon regulator [Shigella ... | 315 | Transcriptional regulator which controls the expression of proteins involved in ... | June 2008 | 3EFB | 84.1% | Shigella flexneri | |||||||||||||||||||
| IDP00106 | 1 | NT01SF3707 | 30042635 | mdaB | modulator of drug activity B | 193 | Virulence | October 2007 | 2AMJ | 97.9% | Shigella flexneri | Cellular processes | Toxin production and resistance | |||||||||||||||||
| IDP00104 | 1 | NT01SF3305 | 30042319 | srlB | PTS system, glucitol/sorbitol-specific e... | 123 | October 2007 | 2F9H | 25.2% | Shigella flexneri | Transport and binding proteins | Carbohydrates, organic alcohols, and acids | ||||||||||||||||||
| IDP00108 | 1 | NT01SF4751 | 30043076 | fdhE | FdhE protein | 309 | October 2007 | 2FIY | 39.5% | Shigella flexneri | Central intermediary metabolism | Other | ||||||||||||||||||
| IDP00112 | 1 | NT01SF5194 | 30043810 | hflK | protease specific for phage lambda cII r... | 419 | Essential | October 2007 | 3BK6 | 11% | Shigella flexneri | Protein fate | Degradation of proteins, peptides, and glycopeptides | |||||||||||||||||
| IDP00109 | 1 | NT01SF4517 | 30043269 | recF | Rec protein | 357 | Essential | October 2007 | 2O5V | 27.2% | Shigella flexneri | DNA metabolism | DNA replication, recombination, and repair | |||||||||||||||||
| IDP00105 | 1 | NT01SF3662 | 30042589 | S3225 | putative class II aminotransferase | 116 | October 2007 | 2JG2 | 39.7% | Shigella flexneri | Central intermediary metabolism | Other | ||||||||||||||||||
| IDP00100 | 1 | NT01SF2345 | 30041591 | cheW | positive regulator of CheA protein activ... | 167 | October 2007 | 2HO9 | 100% | Shigella flexneri | Cellular processes | Chemotaxis and motility | ||||||||||||||||||
| IDP00090 | 1 | NT01SF0319 | 30040101 | crl | transcriptional regulator of cryptic csg... | 133 | October 2007 | Shigella flexneri | Cell envelope | Surface structures | ||||||||||||||||||||
| IDP00111 | 1 | NT02SF4808 | 30043741 | pmbA | putative peptide maturation protein | 450 | Virulence | October 2007 | 1VL4 | 27.6% | Shigella flexneri | Cellular processes | Toxin production and resistance | |||||||||||||||||
| IDP00098 | 1 | NT01SF2011 | 30041408 | slyA | transcriptional regulator | 146 | Virulence | October 2007 | 3DEU | 88.4% | Shigella flexneri | Cellular processes | Toxin production and resistance | |||||||||||||||||
| IDP00103 | 1 | NT01SF3270 | 30042295 | ygaC | hypothetical protein S2885 | 114 | October 2007 | 2G7J | 86.8% | Shigella flexneri | Cell envelope | Other | ||||||||||||||||||
| IDP00110 | 1 | NT01SF4145 | 30043548 | glgC | glucose-1-phosphate adenylyltransferase ... | 431 | October 2007 | 3BRK | 55.2% | Shigella flexneri | Energy metabolism | Biosynthesis and degradation of polysaccharides | ||||||||||||||||||
| IDP00101 | 1 | NT01SF2638 | 30041803 | mrp | putative ATPase | 369 | Essential | October 2007 | 2PH1 | 27.1% | Shigella flexneri | Unknown function | General | |||||||||||||||||
| IDP00107 | 1 | NT01SF4834 | 30043015 | argC | N-acetyl-gamma-glutamylphosphate reducta... | 334 | October 2007 | 3DR3 | 100% | Shigella flexneri | Amino acid biosynthesis | Glutamate family | ||||||||||||||||||
| IDP00092 | 1 | NT01SF0466 | 30040219 | hemH | ferrochelatase | 320 | Essential | October 2007 | 1L8X | 29.4% | Shigella flexneri | Biosynthesis of cofactors, prosthetic groups, and carriers | Heme, porphyrin, and cobalamin | |||||||||||||||||
| IDP00091 | 1 | NTL01SF0342 | 30040153 | ribD | bifunctional pyrimidine deaminase/reduct... | 367 | Essential | October 2007 | 2G6V | 97.8% | Shigella flexneri | Biosynthesis of cofactors, prosthetic groups, and carriers | Riboflavin, FMN, and FAD | |||||||||||||||||
| IDP00097 | 1 | NTL02SF1117 | 30040935 | S1242 | hypothetical protein S1242 | 773 | Virulence | October 2007 | Shigella flexneri | Cellular processes | Pathogenesis | |||||||||||||||||||
| IDP00095 | 1 | NT01SF1278 | 30040854 | flgN | flagella synthesis protein FlgN | 138 | October 2007 | Shigella flexneri | Cell envelope | Surface structures | ||||||||||||||||||||
| IDP00093 | 1 | NT01SF0510 | 30040252 | ybbF | hypothetical protein S0463 | 240 | Essential | October 2007 | Shigella flexneri | Unknown function | General | |||||||||||||||||||
| IDP00094 | 1 | NT01SF0993 | 30040622 | lrp | regulator for leucine (or lrp) regulon a... | 164 | October 2007 | 2GQQ | 99.4% | Shigella flexneri | Central intermediary metabolism | Other | ||||||||||||||||||
| IDP00099 | 1 | NT02SF1983 | 30041448 | ynhD | putative ATP-binding component of a tran... | 248 | October 2007 | 2D3W | 99.6% | Shigella flexneri | Transport and binding proteins | Unknown substrate | ||||||||||||||||||
| IDP00102 | 1 | NT01SF2944 | 30042031 | evgA | putative positive transcription regulato... | 204 | October 2007 | 3F6C | 64.7% | Shigella flexneri | Cell envelope | Surface structures | ||||||||||||||||||
| IDP00096 | 1 | NTL02SF1070 | 30040886 | ycfO | hypothetical protein S1191 | 341 | October 2007 | 1TR9 | 55.7% | Shigella flexneri | Energy metabolism | Biosynthesis and degradation of polysaccharides | ||||||||||||||||||
| IDP02460 | 1 | YPO1675 | 16121939 | cheD | methyl-accepting chemotaxis protein [Yer... | 557 | N/A | June 2008 | 1QU7 | 34.5% | Yersinia pestis | Protein fate | Protein folding and stabilization | |||||||||||||||||
| IDP00436 | 1 | YPO3358 | 16123508 | surE | stationary phase survival protein SurE | 254 | Conserved Gene / Pathway | March 2008 | 2PHJ | 41.3% | Yersinia pestis | Cellular processes | Adaptations to atypical conditions | |||||||||||||||||
| IDP02411 | 1 | YPO3640 | 16123782 | hypothetical protein YPO3640 [Yersinia p... | 448 | N/A | June 2008 | Yersinia pestis | Cell envelope | Other | ||||||||||||||||||||
| IDP00489 | 1 | YPO1533 | 16121806 | putative iron-siderophore transport syst... | 282 | Conserved Gene / Pathway | March 2008 | 2NQ2 | 25.5% | Yersinia pestis | Transport and binding proteins | Cations and iron carrying compounds | ||||||||||||||||||
| IDP00502 | 1 | YPO2045 | 16122284 | putative hemolysin | 1576 | Conserved Gene / Pathway | March 2008 | 1RWR | 5.5% | Yersinia pestis | Cellular processes | Toxin production and resistance | ||||||||||||||||||
| IDP00469 | 1 | YPO0139 | 16120482 | hslO | Hsp33-like chaperonin | 293 | Conserved Gene / Pathway | March 2008 | 1I7F | 71% | Yersinia pestis | Protein fate | Protein folding and stabilization | |||||||||||||||||
| IDP00440 | 1 | YPO2208 | 16122436 | trpE | anthranilate synthase component I | 521 | Conserved Gene / Pathway | March 2008 | 1I7Q | 79.7% | Yersinia pestis | Amino acid biosynthesis | Aromatic amino acid family | |||||||||||||||||
| IDP00200 | 1 | YPO1473 | 16121748 | - | hypothetical protein | 766 | Virulence | October 2007 | Yersinia pestis | Energy metabolism | Glycolysis/gluconeogenesis | |||||||||||||||||||
| IDP00464 | 1 | YPO2522 | 16122741 | hypothetical protein YPO2522 | 319 | Drug Target Function | March 2008 | 1V8G | 24.5% | Yersinia pestis | Cell envelope | Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides | ||||||||||||||||||
| IDP00530 | 1 | YPO2736 | 16122940 | ccmC | putative heme exporter protein C | 245 | Virulence Associated Factor | March 2008 | Yersinia pestis | Cellular processes | Other | |||||||||||||||||||
| IDP02124 | 1 | YPO1275 | 16121560 | spr | putative outer membrane lipoprotein [Yer... | 194 | N/A | June 2008 | 2K1G | 47.4% | Yersinia pestis | Cell envelope | Other | |||||||||||||||||
| IDP00596 | 1 | YPO0555 | 16120883 | murG | N-acetylglucosaminyl transferase | 356 | Drug Target Function | March 2008 | 1F0K | 78.4% | Yersinia pestis | Cell envelope | Biosynthesis and degradation of murein sacculus and peptidoglycan | |||||||||||||||||
| IDP00187 | 1 | YPO0773 | 16121086 | - | putative thioesterase | 254 | Virulence | October 2007 | 2RON | 26.4% | Yersinia pestis | Regulatory functions | Other | |||||||||||||||||
| IDP01665 | 1 | YPO3001 | 16123182 | putative pyridine nucleotide-disulphide ... | 548 | N/A | June 2008 | 1YQZ | 31.8% | Yersinia pestis | Cellular processes | Detoxification | ||||||||||||||||||
| IDP00413 | 1 | YPCD1.60 | 16082748 | yscK | type III secretion apparatus component | 209 | Virulence Associated Factor | March 2008 | Yersinia pestis | Cell envelope | Biosynthesis and degradation of murein sacculus and peptidoglycan | |||||||||||||||||||
| IDP02223 | 1 | YPO0550 | 16120878 | murE | UDP-N-acetylmuramoylalanyl-D-glutamate--... | 490 | N/A | June 2008 | 1E8C | 76.9% | Yersinia pestis | Cell envelope | Biosynthesis and degradation of murein sacculus and peptidoglycan | |||||||||||||||||
| IDP00580 | 1 | YPO0059 | 16120412 | kbl | 2-amino-3-ketobutyrate coenzyme A ligase... | 403 | Conserved Gene / Pathway | March 2008 | 1FC4 | 82.9% | Yersinia pestis | Biosynthesis of cofactors, prosthetic groups, and carriers | Biotin | |||||||||||||||||
| IDP00233 | 1 | YPO3676 | 16123819 | - | putative phage-related protein | 133 | Virulence | October 2007 | 2VO9 | 25.6% | Yersinia pestis | Hypothetical proteins | Conserved | |||||||||||||||||
| IDP00528 | 1 | YPO0481 | 16120811 | carA | carbamoyl phosphate synthase small subun... | 391 | Drug Target Function | March 2008 | 1BXR | 84.4% | Yersinia pestis | Purines, pyrimidines, nucleosides, and nucleotides | Pyrimidine ribonucleotide biosynthesis | |||||||||||||||||
| IDP02435 | 1 | YPO0152 | 16120495 | aroB | 3-dehydroquinate synthase [Yersinia pest... | 362 | N/A | June 2008 | 1DQS | 38.1% | Yersinia pestis | Amino acid biosynthesis | Aromatic amino acid family | |||||||||||||||||
| IDP00510 | 1 | YPO3572 | 16123716 | hypothetical protein YPO3572 | 207 | Virulence Associated Factor | March 2008 | 2QGU | 30% | Yersinia pestis | Cell envelope | Other | ||||||||||||||||||
| IDP01651 | 1 | YPO2946 | 16123129 | clpB5 | Clp ATPase [Yersinia pestis CO92] | 891 | N/A | June 2008 | 1QVR | 35.5% | Yersinia pestis | Protein fate | Degradation of proteins, peptides, and glycopeptides | |||||||||||||||||
| IDP02229 | 1 | YPO1302 | 16121584 | psaF | hypothetical protein YPO1302 [Yersinia p... | 162 | N/A | June 2008 | Yersinia pestis | Energy metabolism | Photosynthesis | |||||||||||||||||||
| IDP00597 | 1 | YPO3909 | 16124041 | murI | glutamate racemase | 287 | Conserved Gene / Pathway | March 2008 | 2JFN | 71.4% | Yersinia pestis | Cell envelope | Biosynthesis and degradation of murein sacculus and peptidoglycan | |||||||||||||||||
| IDP02104 | 1 | YPO1074 | 16121375 | D,D-heptose 1,7-bisphosphate phosphatase... | 188 | N/A | June 2008 | 2GMW | 80.9% | Yersinia pestis | Unknown function | General | ||||||||||||||||||
| IDP00588 | 1 | YPO2077 | 16122316 | minD | cell division inhibitor MinD | 270 | Conserved Gene / Pathway | March 2008 | 1HYQ | 32.6% | Yersinia pestis | Cellular processes | Cell division | |||||||||||||||||
| IDP00198 | 1 | YPO1367 | 16121647 | - | conserved hypothetical protein | 106 | Similar to Essential SALTY | October 2007 | 1MBU | 84.9% | Yersinia pestis | |||||||||||||||||||
| IDP00410 | 1 | YPO0548 | 16120876 | ftsL | cell division protein FtsL | 105 | Conserved Gene / Pathway | March 2008 | Yersinia pestis | Cellular processes | Cell division | |||||||||||||||||||
| IDP02230 | 1 | YPO0829 | 16121138 | putative sulfatase [Yersinia pestis CO92... | 517 | N/A | June 2008 | 2QZU | 40.2% | Yersinia pestis | Unknown function | Enzymes of unknown specificity | ||||||||||||||||||
| IDP00232 | 1 | YPO3480 | 16123626 | - | conserved hypothetical protein | 292 | Virulence | October 2007 | Yersinia pestis | Transport and binding proteins | Cations and iron carrying compounds | |||||||||||||||||||
| IDP00422 | 1 | YPO0378 | 16120713 | purA | adenylosuccinate synthetase | 432 | Virulence Associated Factor | March 2008 | 1KJX | 88.7% | Yersinia pestis | Purines, pyrimidines, nucleosides, and nucleotides | Purine ribonucleotide biosynthesis | |||||||||||||||||
| IDP00520 | 1 | YPO3360 | 16123510 | ispF | 2-C-methyl-D-erythritol 2,4-cyclodiphosp... | 162 | Conserved Gene / Pathway | March 2008 | 3F6M | 100% | Yersinia pestis | Biosynthesis of cofactors, prosthetic groups, and carriers | Other | |||||||||||||||||
| IDP01991 | 1 | YPO0108 | 16120455 | cytR | DNA-binding transcriptional regulator Cy... | 342 | N/A | June 2008 | 1RZR | 34.8% | Yersinia pestis | Regulatory functions | Other | |||||||||||||||||
| IDP02413 | 1 | YPO3568 | 16123712 | degS | serine endoprotease [Yersinia pestis CO9... | 362 | N/A | June 2008 | 1SOT | 63% | Yersinia pestis | Protein fate | Degradation of proteins, peptides, and glycopeptides | |||||||||||||||||
| IDP01648 | 1 | YPO2944 | 16123127 | putative pili chaperone protein [Yersini... | 259 | N/A | June 2008 | 1N0L | 29% | Yersinia pestis | Cell envelope | Surface structures | ||||||||||||||||||
| IDP00208 | 1 | YPO1979 | 16122221 | - | putative dehydrogenase | 338 | Virulence | October 2007 | 2PK3 | 21.3% | Yersinia pestis | Transport and binding proteins | Amino acids, peptides and amines | |||||||||||||||||
| IDP02422 | 1 | YPO1666 | 16121930 | cheA | chemotaxis protein CheA [Yersinia pestis... | 723 | N/A | June 2008 | 1B3Q | 22.7% | Yersinia pestis | Cellular processes | Chemotaxis and motility | |||||||||||||||||
| IDP00212 | 1 | YPO2123 | 16122358 | - | putative phage minor tail protein | 236 | Virulence | October 2007 | Yersinia pestis | Cellular processes | Chemotaxis and motility | |||||||||||||||||||
| IDP00556 | 1 | YPO2686 | 16122891 | pgm | phosphoglucomutase | 547 | Drug Target Function | March 2008 | 2FUV | 82.4% | Yersinia pestis | Energy metabolism | Sugars | |||||||||||||||||
| IDP02265 | 1 | YPO1303 | 16121585 | psaA | pH 6 antigen precursor (antigen 4) (adhe... | 158 | N/A | June 2008 | Yersinia pestis | Cell envelope | Other | |||||||||||||||||||
| IDP02388 | 1 | YPO1407 | 16121687 | hypothetical protein YPO1407 [Yersinia p... | 618 | N/A | June 2008 | < | ||||||||||||||||||||||