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| CSGID ID | Priority | Locus Tag | NCBI GI | Gene Name |
Common Name | Sequence Length |
Comment | Project | Homolog PDB ID |
Homolog Sequence Identity |
Target Organism | TIGR Main Role | TIGR Subrole | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| IDP02638 | 1 | YPO3725 | 16123862 | aceA | isocitrate lyase [Yersinia pestis CO92] | 435 | N/A | June 2008 | 1IGW | 84.4% | Yersinia pestis | Energy metabolism | TCA cycle | |||||||||||||||||
| IDP00595 | 1 | YPO3760 | 16123897 | murB | UDP-N-acetylenolpyruvoylglucosamine redu... | 345 | Drug Target Function | March 2008 | 1MBB | 60.9% | Yersinia pestis | Cell envelope | Biosynthesis and degradation of murein sacculus and peptidoglycan | |||||||||||||||||
| IDP00503 | 1 | YPO3766 | 16123902 | fadB | multifunctional fatty acid oxidation com... | 729 | Virulence Associated Factor | March 2008 | 1WDK | 55.1% | Yersinia pestis | Cellular processes | Detoxification | |||||||||||||||||
| IDP00415 | 1 | YPO3767 | 16123903 | fadA | 3-ketoacyl-CoA thiolase | 387 | Virulence Associated Factor | March 2008 | 1WDK | 64.6% | Yersinia pestis | Cellular processes | Detoxification | |||||||||||||||||
| IDP02472 | 1 | YPO3785 | 16123919 | hypothetical protein YPO3785 [Yersinia p... | 276 | N/A | June 2008 | 1YWF | 27.2% | Yersinia pestis | Energy metabolism | Sugars | ||||||||||||||||||
| IDP00586 | 1 | YPO3789 | 16123923 | metR | lysR-family transcriptional regulatory p... | 317 | Virulence Associated Factor | March 2008 | 1AL3 | 23.7% | Yersinia pestis | Amino acid biosynthesis | Aspartate family | |||||||||||||||||
| IDP00475 | 1 | YPO3808 | 16123942 | livK | branched-chain amino acid-binding protei... | 371 | Virulence Associated Factor | March 2008 | 1USG | 71.7% | Yersinia pestis | Transport and binding proteins | Amino acids, peptides and amines | |||||||||||||||||
| IDP00547 | 1 | YPO3813 | 16123947 | ftsE | cell division protein FtsE | 222 | Conserved Gene / Pathway | March 2008 | 3DHW | 39.6% | Yersinia pestis | Cellular processes | Cell division | |||||||||||||||||
| IDP00549 | 1 | YPO3814 | 16123948 | ftsY | cell division protein | 541 | Conserved Gene / Pathway | March 2008 | 2QY9 | 49% | Yersinia pestis | Cellular processes | Cell division | |||||||||||||||||
| IDP01788 | 1 | YPO3827 | 16123962 | glpQ | glycerophosphodiester phosphodiesterase ... | 371 | N/A | June 2008 | 1YDY | 71.7% | Yersinia pestis | Central intermediary metabolism | Other | |||||||||||||||||
| IDP00445 | 1 | YPO3843 | 16123978 | xerC | site-specific tyrosine recombinase XerC ... | 303 | Conserved Gene / Pathway | March 2008 | 1A0P | 35.6% | Yersinia pestis | DNA metabolism | DNA replication, recombination, and repair | |||||||||||||||||
| IDP00477 | 1 | YPO3845 | 16123980 | dapF | diaminopimelate epimerase | 274 | Conserved Gene / Pathway | March 2008 | 1GQZ | 75.9% | Yersinia pestis | Amino acid biosynthesis | Aspartate family | |||||||||||||||||
| IDP00560 | 1 | YPO3852 | 16123987 | hemY | putative protoheme IX biogenesis protein... | 406 | Conserved Gene / Pathway | March 2008 | Yersinia pestis | Unknown function | General | |||||||||||||||||||
| IDP00425 | 1 | YPO3863 | 16123998 | wecC | UDP-N-acetyl-D-mannosamine dehydrogenase... | 420 | Conserved Gene / Pathway | March 2008 | 2O3J | 29.8% | Yersinia pestis | Cell envelope | Biosynthesis and degradation of murein sacculus and peptidoglycan | |||||||||||||||||
| IDP02064 | 1 | YPO3878 | 16124011 | putative fimbrial chaperone [Yersinia pe... | 243 | N/A | June 2008 | 1P5U | 28.8% | Yersinia pestis | Protein fate | Protein folding and stabilization | ||||||||||||||||||
| IDP00597 | 1 | YPO3909 | 16124041 | murI | glutamate racemase | 287 | Conserved Gene / Pathway | March 2008 | 2JFN | 71.4% | Yersinia pestis | Cell envelope | Biosynthesis and degradation of murein sacculus and peptidoglycan | |||||||||||||||||
| IDP00515 | 1 | YPO3922 | 16124053 | hemophore HasA | 205 | Virulence Associated Factor | March 2008 | 1B2V | 29.8% | Yersinia pestis | Unclassified | Role category not yet assigned | ||||||||||||||||||
| IDP00537 | 1 | YPO3924 | 16124055 | argH | argininosuccinate lyase | 457 | Conserved Gene / Pathway | March 2008 | 1TJ7 | 88.8% | Yersinia pestis | Amino acid biosynthesis | Glutamate family | |||||||||||||||||
| IDP00203 | 1 | YPO3925 | 16124056 | argB | acetylglutamate kinase | 257 | Virulence | October 2007 | 1GS5 | 84% | Yersinia pestis | Transport and binding proteins | Amino acids, peptides and amines | |||||||||||||||||
| IDP00226 | 1 | YPO3938 | 16124066 | glgP | glycogen phosphorylase | 815 | Virulence | October 2007 | 1EM6 | 49.9% | Yersinia pestis | Cell envelope | Biosynthesis and degradation of murein sacculus and peptidoglycan | |||||||||||||||||
| IDP00553 | 1 | YPO3939 | 16124067 | glgA | glycogen synthase | 476 | Drug Target Function | March 2008 | 2QZS | 71.4% | Yersinia pestis | Energy metabolism | Biosynthesis and degradation of polysaccharides | |||||||||||||||||
| IDP02650 | 1 | YPO3962 | 16124090 | sugar-binding transport protein [Yersini... | 314 | N/A | June 2008 | 2IOY | 34.7% | Yersinia pestis | Transport and binding proteins | Carbohydrates, organic alcohols, and acids | ||||||||||||||||||
| IDP00573 | 1 | YPO3991 | 16124118 | putative insulinase family protease | 499 | Drug Target Function | March 2008 | 1HR6 | 12% | Yersinia pestis | Protein fate | Degradation of proteins, peptides, and glycopeptides | ||||||||||||||||||
| IDP00536 | 1 | YPO4003 | 16124128 | dppA | periplasmic dipeptide transport protein ... | 535 | Virulence Associated Factor | March 2008 | 1DPP | 81.5% | Yersinia pestis | Transport and binding proteins | Amino acids, peptides and amines | |||||||||||||||||
| IDP00569 | 1 | YPO4016 | 16124139 | hutH | histidine ammonia-lyase | 510 | Drug Target Function | March 2008 | 1B8F | 77.6% | Yersinia pestis | Energy metabolism | Amino acids and amines | |||||||||||||||||
| IDP00516 | 1 | YPO4022 | 16124145 | putative iron transport protein | 317 | Conserved Gene / Pathway | March 2008 | 2CHU | 31.5% | Yersinia pestis | Transport and binding proteins | Unknown substrate | ||||||||||||||||||
| IDP00176 | 1 | YPO4024 | 16124147 | - | putative iron transport permease | 335 | Virulence | October 2007 | 2QI9 | 23.9% | Yersinia pestis | Hypothetical proteins | Conserved | |||||||||||||||||
| IDP00405 | 1 | YPO4025 | 16124148 | putative iron ABC transporter, ATP-bindi... | 252 | Conserved Gene / Pathway | March 2008 | 2IT1 | 29.4% | Yersinia pestis | Transport and binding proteins | Unknown substrate | ||||||||||||||||||
| IDP00543 | 1 | YPO4057 | 16124173 | fdoH | formate dehydrogenase-O, iron-sulfur sub... | 323 | Conserved Gene / Pathway | March 2008 | 1KQF | 70.9% | Yersinia pestis | Energy metabolism | Anaerobic | |||||||||||||||||
| IDP00427 | 1 | YPO4119 | 16124227 | glmU | bifunctional N-acetylglucosamine-1-phosp... | 456 | Drug Target Function | March 2008 | 1HV9 | 82.2% | Yersinia pestis | Cell envelope | Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides | |||||||||||||||||
| IDP00083 | 1 | NTL01ST0073 | 16418570 | caiA | putative acyl-CoA dehydrogenase, carniti... | 380 | Essential | October 2007 | 2DVL | 32.6% | Salmonella typhimurium | Fatty acid and phospholipid metabolism | Degradation | |||||||||||||||||
| IDP00068 | 1 | NT01ST0271 | 16418722 | pyrH | uridylate kinase | 241 | Essential | October 2007 | 2BNE | 97.9% | Salmonella typhimurium | Amino acid biosynthesis | Glutamate family | |||||||||||||||||
| IDP00069 | 1 | NTL01ST0342 | 16418853 | STM0352 | putative cation efflux pump | 408 | Virulence | October 2007 | 1T5E | 31.1% | Salmonella typhimurium | Cellular processes | Toxin production and resistance | |||||||||||||||||
| IDP00089 | 1 | NT01ST0526 | 16418927 | dxs | 1-deoxyxylulose-5-phosphate synthase; fl... | 620 | Essential | October 2007 | 2O1S | 96.3% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Other | |||||||||||||||||
| IDP00084 | 1 | NT01ST1435 | 16419673 | yceI | putative secreted protein | 191 | Essential | October 2007 | 1Y0G | 91.1% | Salmonella typhimurium | Protein fate | Degradation of proteins, peptides, and glycopeptides | |||||||||||||||||
| IDP00070 | 1 | NT01ST1465 | 16419700 | flgK | hook-filament junction protein 1 | 553 | Virulence | October 2007 | 2D4Y | 83.5% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Pyridine nucleotides | |||||||||||||||||
| IDP00085 | 1 | NTL01ST1174 | 16419726 | nagZ | putative glycosyl hydrolase | 341 | Virulence | October 2007 | 1TR9 | 55.4% | Salmonella typhimurium | Cellular processes | Toxin production and resistance | |||||||||||||||||
| IDP00086 | 1 | NT01ST1973 | 16420114 | yncA | putative acyltransferase | 171 | October 2007 | 3DR6 | 100% | Salmonella typhimurium | Transport and binding proteins | Other | ||||||||||||||||||
| IDP00071 | 1 | NT01ST2260 | 16420352 | yeaZ | putative molecular chaperone | 231 | Essential | October 2007 | 2GEL | 100% | Salmonella typhimurium | Unknown function | General | |||||||||||||||||
| IDP00072 | 1 | NT01ST2585 | 16420605 | hisB | imidazole glycerol-phosphate dehydratase... | 355 | October 2007 | 2FPR | 43.1% | Salmonella typhimurium | Cellular processes | Toxin production and resistance | ||||||||||||||||||
| IDP00087 | 1 | NTL01ST2379 | 16420989 | STM2449 | putative acetyltransferase | 178 | Virulence | October 2007 | 2PDO | 75.3% | Salmonella typhimurium | Cellular processes | Toxin production and resistance | |||||||||||||||||
| IDP00088 | 1 | NT01ST3082 | 16421025 | dapE | N-succinyl-diaminopimelate deacylase | 375 | Essential | October 2007 | 1VGY | 57.6% | Salmonella typhimurium | Amino acid biosynthesis | Aspartate family | |||||||||||||||||
| IDP00073 | 1 | NT01ST3324 | 16421221 | rimM | 16S rRNA processing protein | 182 | Essential | October 2007 | 2F1L | 40.7% | Salmonella typhimurium | Unclassified | Role category not yet assigned | |||||||||||||||||
| IDP00074 | 1 | NT01ST3685 | 16421504 | pyrG | CTP synthetase | 545 | Essential | October 2007 | 1S1M | 95% | Salmonella typhimurium | Unclassified | Role category not yet assigned | |||||||||||||||||
| IDP00075 | 1 | NTL01ST3174 | 16421824 | yraO | putative phosphoheptose isomerase | 196 | October 2007 | 2YVA | 98% | Salmonella typhimurium | Cell envelope | Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides | ||||||||||||||||||
| IDP00076 | 1 | NT01ST4228 | 16421936 | yhdH | putative oxidoreductase | 324 | October 2007 | 1O89 | 88.3% | Salmonella typhimurium | Cellular processes | Cell division | ||||||||||||||||||
| IDP00077 | 1 | NTL01ST3489 | 16422154 | yhiQ | putative SAM-dependent methyltransferase... | 252 | October 2007 | 2PKW | 100% | Salmonella typhimurium | Central intermediary metabolism | Other | ||||||||||||||||||
| IDP00078 | 1 | NTL01ST3606 | 16422278 | rfaF | ADP-heptose; LPS heptosyltransferase 1 | 348 | October 2007 | 1PSW | 91.7% | Salmonella typhimurium | Cell envelope | Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides | ||||||||||||||||||
| IDP00079 | 1 | NT01ST4845 | 16422456 | rbsD | D-ribose high-affinity transport system ... | 139 | October 2007 | 3DSA | 100% | Salmonella typhimurium | Transport and binding proteins | Carbohydrates, organic alcohols, and acids | ||||||||||||||||||
| IDP00080 | 1 | NT01ST5073 | 16422645 | yneC | putative inner membrane protein | 109 | October 2007 | 2GFF | 68.8% | Salmonella typhimurium | Cell envelope | Other | ||||||||||||||||||
| IDP00081 | 1 | NT01ST5473 | 16422973 | ytfP | putative cytoplasmic protein | 114 | Essential | October 2007 | 1XHS | 92.1% | Salmonella typhimurium | Unknown function | General | |||||||||||||||||
| IDP00082 | 1 | NTL01ST4427 | 16423142 | lplA | lipoate-protein ligase A | 338 | October 2007 | 1X2G | 93.2% | Salmonella typhimurium | Cell envelope | Other | ||||||||||||||||||
| IDP00901 | 1 | STM0004 | 16763394 | thrC | threonine synthase | 428 | Conserved Gene / Pathway | March 2008 | 1VB3 | 93.5% | Salmonella typhimurium | Amino acid biosynthesis | Aspartate family | |||||||||||||||||
| IDP01845 | 1 | STM0017 | 16763407 | hypothetical protein STM0017 [Salmonella... | 147 | N/A | June 2008 | Salmonella typhimurium | Unclassified | Role category not yet assigned | ||||||||||||||||||||
| IDP01021 | 1 | STM0044 | 16763434 | yaaY | putative cytoplasmic protein | 71 | Conserved Gene / Pathway | March 2008 | Salmonella typhimurium | Protein synthesis | tRNA aminoacylation | |||||||||||||||||||
| IDP00902 | 1 | STM0045 | 16763435 | ribF | bifunctional riboflavin kinase/FMN adeny... | 312 | Conserved Gene / Pathway | March 2008 | 1MRZ | 33% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Riboflavin, FMN, and FAD | |||||||||||||||||
| IDP01022 | 1 | STM0048 | 16763438 | slpA | FKBP-type peptidyl-prolyl cis-trans isom... | 149 | Conserved Gene / Pathway | March 2008 | 1IX5 | 24.8% | Salmonella typhimurium | Protein synthesis | Translation factors | |||||||||||||||||
| IDP01886 | 1 | STM0085 | 16763475 | yabF | glutathione-regulated potassium-efflux s... | 176 | N/A | June 2008 | 3F2V | 36.4% | Salmonella typhimurium | Energy metabolism | Electron transport | |||||||||||||||||
| IDP01883 | 1 | STM0116 | 16763506 | ilvI | acetolactate synthase 3 catalytic subuni... | 553 | N/A | June 2008 | 1JSC | 44.7% | Salmonella typhimurium | Amino acid biosynthesis | Pyruvate family | |||||||||||||||||
| IDP00903 | 1 | STM0123 | 16763513 | murE | UDP-N-acetylmuramoylalanyl-D-glutamate--... | 495 | Essential Gene | March 2008 | 1E8C | 91.5% | Salmonella typhimurium | Cell envelope | Biosynthesis and degradation of murein sacculus and peptidoglycan | |||||||||||||||||
| IDP00904 | 1 | STM0124 | 16763514 | murF | UDP-N-acetylmuramoyl-tripeptide--D-alany... | 452 | Conserved Gene / Pathway | March 2008 | 1GG4 | 87.6% | Salmonella typhimurium | Cell envelope | Biosynthesis and degradation of murein sacculus and peptidoglycan | |||||||||||||||||
| IDP00905 | 1 | STM0126 | 16763516 | murD | UDP-N-acetylmuramoyl-L-alanyl-D-glutamat... | 438 | Essential Gene | March 2008 | 1E0D | 92.2% | Salmonella typhimurium | Cell envelope | Biosynthesis and degradation of murein sacculus and peptidoglycan | |||||||||||||||||
| IDP00906 | 1 | STM0129 | 16763519 | murC | UDP-N-acetylmuramate--L-alanine ligase | 491 | Essential Gene | March 2008 | 2F00 | 94.5% | Salmonella typhimurium | Cell envelope | Biosynthesis and degradation of murein sacculus and peptidoglycan | |||||||||||||||||
| IDP00872 | 1 | STM0138 | 16763528 | yacG | zinc-binding protein | 63 | Conserved Gene / Pathway | March 2008 | 1LV3 | 85.7% | Salmonella typhimurium | Protein synthesis | tRNA aminoacylation | |||||||||||||||||
| IDP00907 | 1 | STM0140 | 16763530 | coaE | dephospho-CoA kinase | 206 | Conserved Gene / Pathway | March 2008 | 1N3B | 88.8% | Salmonella typhimurium | Biosynthesis of cofactors, prosthetic groups, and carriers | Other | |||||||||||||||||
| IDP00908 | 1 | STM0143 | 16763533 | hofB | hypothetical protein STM0143 | 461 | Conserved Gene / Pathway | March 2008 | 1P9R | 37.3% | Salmonella typhimurium | Cell envelope | Surface structures | |||||||||||||||||
| IDP00855 | 1 | STM0146 | 16763536 | ampD | N-acetyl-anhydromuranmyl-L-alanine amida... | 187 | Conserved Gene / Pathway | March 2008 | 1J3G | 89.8% | Salmonella typhimurium | Cellular processes | Toxin production and resistance | |||||||||||||||||
| IDP00909 | 1 | STM0171 | 16763561 | yadF | carbonic anhydrase | 220 | Conserved Gene / Pathway | March 2008 | 1I6O | 90% | Salmonella typhimurium | Central intermediary metabolism | Other | |||||||||||||||||
| IDP00910 | 1 | STM0190 | 16763580 | mrcB | penicillin-binding protein 1b | 840 | Drug Target Function | March 2008 | 2OLU | 18.9% | Salmonella typhimurium | Cell envelope | Biosynthesis and degradation of murein sacculus and peptidoglycan | |||||||||||||||||
| IDP00911 | 1 | STM0191 | 16763581 | fhuA | ferrichrome outer membrane transporter | 729 | Conserved Gene / Pathway | March 2008 | 1QFF | 72.4% | Salmonella typhimurium | Cell envelope | Other | |||||||||||||||||
| IDP00912 | 1 | STM0193 | 16763583 | fhuD | iron-hydroxamate transporter substrate-b... | 296 | Conserved Gene / Pathway | March 2008 | 1ESZ | 75% | Salmonella typhimurium | Transport and binding proteins | Cations and iron carrying compounds | |||||||||||||||||
| IDP01889 | 1 | STM0209 | 16763599 | htrA | serine endoprotease [Salmonella typhimur... | 475 | N/A | June 2008 | 2ZLE | 87.6% | Salmonella typhimurium | Protein fate | Degradation of proteins, peptides, and glycopeptides | |||||||||||||||||
| IDP00879 | 1 | STM0211 | 16763601 | yaeH | putative cytoplasmic protein | 128 | Conserved Gene / Pathway | March 2008 | Salmonella typhimurium | Protein synthesis | tRNA aminoacylation | |||||||||||||||||||
| IDP00913 | 1 | STM0219 | 16763609 | frr | ribosome recycling factor | 185 | Conserved Gene / Pathway | March 2008 | 1EK8 | 94.1% | Salmonella typhimurium | Protein synthesis | Translation factors | |||||||||||||||||
| IDP00914 | ||||||||||||||||||||||||||||||