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Structure of IDP90886

1.8 Angstrom Resolution Crystal Structure of Diaminopimelate Decarboxylase (lysA) from Vibrio cholerae.

Edit deposit information
CSGID target
IDP90886 
PDB Id
3N2B (NCBI MMDB
Authors
G.Minasov,A.Halavaty,L.Shuvalova,I.Dubrovska,J.Winsor,L.Papazisi,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid) 
Responsible person
George Minasov 
Responsible lab
Northwestern University 
Deposition Date
May 17, 2010 
Release Date
Jun 09, 2010 

Annotation

Ligands

Ligand code Name Ligand type
175 3,5-dihydro-5-methylidene-4h-imidazol-4-on

Structure information

Unit cell parameters

Space Group
P 1  
Unit Cell

a=45.39Å, b=80.33Å, c=118.69Å
α=105.31, β=93.62, γ=90.52 
Solvent content
42.02  
Matthews coefficient
2.12  

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
29.94-1.80Å (1.85-1.80Å)  
Rall(%)
18.4 
Rwork(%)
18.3 (26.6) 
Rfree(%)
21.9 (29.1) 
Num. observed reflections
145780 (10578) 
Num. Rfree reflections
7289 (539) 
Completeness(%)
97.5 (96.3) 

Model parameters

Num Atoms
12864  
Num Waters
1121  
Num Hetatoms
1145  
Model mean isotropic B factor
31.860Å2  
RMSD bond length
0.011Å  
RMSD bond angle
1.392°  
Filename uploaded
rcsb059290.pdb (uploaded on Jul 02, 2010 1:42 PM)  
Inserted
Jul 02, 2010