Structure of IDP91369

1.95 Angstrom Resolution Crystal Structure of N-acetyl-D-glucosamine kinase from Vibrio vulnificus.

Edit deposit information
CSGID target
IDP91369 
PDB Id
4DB3 (NCBI MMDB
Authors
G.Minasov,Z.Wawrzak,O.Onopriyenko,T.Skarina,L.Papazisi,A.Savchenko,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid) 
Responsible person
George Minasov 
Responsible lab
Northwestern University 
Deposition Date
Jan 13, 2012 
Release Date
Jan 25, 2012 

Annotation

Ligands

Ligand code Name Ligand type
SO4 crystallization
CL crystallization
ZN ZINC ION biological
175 3,5-dihydro-5-methylidene-4h-imidazol-4-on

Structure information

Unit cell parameters

Space Group
P 64  
Unit Cell

a=80.40Å, b=80.40Å, c=110.42Å
α=90.00, β=90.00, γ=120.00 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
29.45-1.95Å (2.00-1.95Å)  
Rall(%)
17.0 
Rwork(%)
16.8 (25.6) 
Rfree(%)
19.8 (26.2) 
Num. observed reflections
29417 (2134) 
Num. Rfree reflections
1500 (110) 
Completeness(%)
99.9 (99.8) 

Model parameters

Num Atoms
2393  
Num Waters
193  
Num Hetatoms
215  
Model mean isotropic B factor
36.380Å2  
RMSD bond length
0.011Å  
RMSD bond angle
1.453°  
Filename uploaded
rcsb070107.pdb (uploaded on Jan 16, 2012 12:36 PM)  
Inserted
Jan 16, 2012