Structure of IDP91330

2.7 Angstrom Crystal Structure of ABC transporter ATPase from Vibrio vulnificus in Complex with Adenylyl-imidodiphosphate (AMP-PNP).

Edit deposit information
CSGID target
IDP91330 
PDB Id
5D6A (NCBI MMDB
Authors
G.Minasov,Z.Wawrzak,L.Shuvalova,I.Dubrovska,K.Flores,S.Grimshaw,K.Kwon,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid) 
Responsible person
George Minasov 
Responsible lab
Northwestern University 
Deposition Date
Aug 11, 2015 
Release Date
Aug 26, 2015 

Annotation

Ligands

Ligand code Name Ligand type
NA Sodium ion crystallization
ANP phosphoaminophosphonic acid-adenylate ester biological
175 3,5-dihydro-5-methylidene-4h-imidazol-4-on

Structure information

Unit cell parameters

Space Group
P 31 2 1  
Unit Cell

a=104.96Å, b=104.96Å, c=85.35Å
α=90.00, β=90.00, γ=120.00 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
28.55-2.70Å (2.77-2.70Å)  
Rall(%)
20.0 
Rwork(%)
19.4 (25.0) 
Rfree(%)
25.6 (32.4) 
Num. observed reflections
15222 (1098) 
Num. Rfree reflections
1537 (111) 
Completeness(%)
99.8 (99.6) 

Model parameters

Num Atoms
4201  
Num Waters
84  
Num Hetatoms
228  
Model mean isotropic B factor
55.710Å2  
RMSD bond length
0.004Å  
RMSD bond angle
1.051°  
Filename uploaded
5D6A.pdb (uploaded on Aug 31, 2015 2:00 PM)  
Inserted
Aug 31, 2015