Structure of IDP95418

Crystal structure of an aminoglycoside acetyltransferase HMB0020 from an uncultured soil metagenomic sample, apoenzyme form

Edit deposit information
CSGID target
IDP95418 
PDB Id
5F46 (NCBI MMDB
Authors
Z.Xu,T.Skarina,P.J.Stogios,V.Yim,A.Savchenko,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid) 
Responsible person
Peter Stogios 
Responsible lab
University of Calgary 
Deposition Date
Dec 03, 2015 
Release Date
Dec 16, 2015 

Annotation

Ligands

Ligand code Name Ligand type
175 3,5-dihydro-5-methylidene-4h-imidazol-4-on

Structure information

Unit cell parameters

Space Group
P 21 21 21  
Unit Cell

a=54.85Å, b=61.81Å, c=114.83Å
α=90.00, β=90.00, γ=90.00 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
29.84-1.85Å (1.91-1.85Å)  
Rall(%)
21.1 
Rwork(%)
20.9 (27.8) 
Rfree(%)
25.3 (30.2) 
Num. observed reflections
33477 (2479) 
Num. Rfree reflections
1670 (127) 
Completeness(%)
93.5 (86.0) 

Model parameters

Num Atoms
2541  
Num Waters
354  
Num Hetatoms
379  
Model mean isotropic B factor
47.770Å2  
RMSD bond length
0.004Å  
RMSD bond angle
0.781°  
RMSD dihedral angle
14.16°
 
Filename uploaded
5f46.pdb (uploaded on Mar 24, 2016 2:37 PM)  
Inserted
Dec 04, 2015