Structure of IDP95418

Crystal structure of an aminoglycoside acetyltransferase HMB0020 from an uncultured soil metagenomic sample in complex with trehalose

Edit deposit information
CSGID target
IDP95418 
PDB Id
5F47 (NCBI MMDB
Authors
Z.Xu,T.Skarina,Z.Wawrzak,P.J.Stogios,V.Yim,A.Savchenko,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid) 
Responsible person
Peter Stogios 
Responsible lab
University of Calgary 
Deposition Date
Dec 03, 2015 
Release Date
Dec 30, 2015 

Annotation

Ligands

Ligand code Name Ligand type
CA crystallization
CL crystallization
175 3,5-dihydro-5-methylidene-4h-imidazol-4-on

Structure information

Unit cell parameters

Space Group
C 1 2 1  
Unit Cell

a=140.00Å, b=53.95Å, c=46.02Å
α=90.00, β=105.19, γ=90.00 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
26.98-1.50Å (1.53-1.50Å)  
Rall(%)
15.7 
Rwork(%)
15.6 (22.8) 
Rfree(%)
17.8 (24.0) 
Num. observed reflections
53547 (3255) 
Num. Rfree reflections
2077 (132) 
Completeness(%)
96.4 (89.0) 

Model parameters

Num Atoms
2569  
Num Waters
676  
Num Hetatoms
728  
Model mean isotropic B factor
28.290Å2  
RMSD bond length
0.008Å  
RMSD bond angle
1.139°  
RMSD dihedral angle
14.157°
 
Filename uploaded
5F47.pdb (uploaded on Jan 06, 2016 1:31 PM)  
Inserted
Dec 04, 2015