Structure of IDP95418

Crystal structure of an aminoglycoside acetyltransferase HMB0020 from an uncultured soil metagenomic sample in complex with malonyl-coenzyme A

Edit deposit information
CSGID target
IDP95418 
PDB Id
5F49 (NCBI MMDB
Authors
Z.Xu,T.Skarina,P.J.Stogios,V.Yim,A.Savchenko,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid) 
Responsible person
Peter Stogios 
Responsible lab
University of Calgary 
Deposition Date
Dec 03, 2015 
Release Date
Dec 16, 2015 

Annotation

Ligands

Ligand code Name Ligand type
MLC crystallization
MG biological
175 3,5-dihydro-5-methylidene-4h-imidazol-4-on

Structure information

Unit cell parameters

Space Group
P 1  
Unit Cell

a=46.16Å, b=54.05Å, c=84.85Å
α=72.30, β=74.57, γ=88.07 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
23.49-2.15Å (2.20-2.15Å)  
Rall(%)
19.4 
Rwork(%)
19.2 (27.1) 
Rfree(%)
22.7 (28.0) 
Num. observed reflections
41128 (2550) 
Num. Rfree reflections
2056 (131) 
Completeness(%)
95.4 (91.0) 

Model parameters

Num Atoms
5000  
Num Waters
410  
Num Hetatoms
639  
Model mean isotropic B factor
40.970Å2  
RMSD bond length
0.008Å  
RMSD bond angle
1.929°  
RMSD dihedral angle
16.106°
 
Filename uploaded
5F49.pdb (uploaded on Jan 06, 2016 1:35 PM)  
Inserted
Dec 04, 2015