Structure of IDP95479

2.15 Angstrom Crystal Structure of S-adenosylhomocysteinase from Cryptosporidium parvum in Complex with D-Eritadenine and NAD

Edit deposit information
CSGID target
IDP95479 
PDB Id
5JPI (NCBI MMDB
Authors
G.Minasov,L.Shuvalova,O.Kiryukhina,I.Dubrovska,B.Bishop,K.Kwon,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid) 
Responsible person
George Minasov 
Responsible lab
Northwestern University 
Deposition Date
May 03, 2016 
Release Date
May 18, 2016 

Annotation

Ligands

Ligand code Name Ligand type
DEA d-eritadenine biological
GOL crystallization
PEG crystallization
TRS Tris(hydroxymethyl)aminomethane crystallization
PO4 PHOSPHATE ION crystallization
CL crystallization
EDO crystallization
175 3,5-dihydro-5-methylidene-4h-imidazol-4-on

Structure information

Unit cell parameters

Space Group
P 21 21 21  
Unit Cell

a=115.85Å, b=121.22Å, c=178.77Å
α=90.00, β=90.00, γ=90.00 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
29.97-2.15Å (2.21-2.15Å)  
Rall(%)
14.4 
Rwork(%)
14.2 (21.8) 
Rfree(%)
18.1 (25.4) 
Num. observed reflections
136596 (9860) 
Num. Rfree reflections
6829 (499) 
Completeness(%)
99.9 (99.1) 

Model parameters

Num Atoms
15876  
Num Waters
1223  
Num Hetatoms
1598  
Model mean isotropic B factor
40.240Å2  
RMSD bond length
0.009Å  
RMSD bond angle
1.498°  
Filename uploaded
idp95479-j-final.pdb (uploaded on Jul 25, 2016 12:30 PM)  
Inserted
Jul 25, 2016