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Structure of IDP00347

Crystal structure of glutamate racemase from Listeria monocytogenes

Edit deposit information
CSGID target
IDP00347 
PDB Id
3HFR (NCBI MMDB
Authors
K.A.Majorek,M.Chruszcz,M.D.Zimmerman,M.M.Klimecka,M.Cymborowski,T.Skarina,O.Onopriyenko,J.Stam,Z.Otwinowski,W.F.Anderson,A.Savchenko,W.Minor,Center For Structural Genomics Of Infectious Diseases (Csgid) 
Responsible person
Karolina Majorek 
Responsible lab
University of Virginia 
Deposition Date
May 12, 2009 
Release Date
Jun 09, 2009 

Annotation

Ligands

Ligand code Name Ligand type
6JZ 3,6,9,12,15-pentaoxaheptadecane
CL
AE3 2-(2-ethoxyethoxy)ethanol
P3G 3,6,9,12,15-pentaoxaheptadecane
MSE modified residue

Structure information

Unit cell parameters

Space Group
P 43 21 2  
Unit Cell

a=66.65Å, b=66.65Å, c=257.99Å
α=90.00, β=90.00, γ=90.00 
Solvent content
48.84  
Matthews coefficient
2.4  

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
50.00-2.30Å (2.36-2.30Å)  
Rall(%)
19.1 
Rwork(%)
18.8 (21.0) 
Rfree(%)
24.4 (28.7) 
Num. observed reflections
26755 (1901) 
Num. Rfree reflections
1337 (79) 
Completeness(%)
99.7 (98.3) 

Model parameters

Num Atoms
3976  
Num Waters
240  
Num Hetatoms
405  
Model mean isotropic B factor
19.680Å2  
RMSD bond length
0.010Å  
RMSD bond angle
1.222°  
Filename uploaded
rcsb053078.pdb (uploaded on May 13, 2009 5:18 PM)  
Inserted
May 13, 2009