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Structure of IDP01486

Crystal structure of 3-keto-L-gulonate-6-phosphate decarboxylase from Vibrio cholerae O1 biovar El Tor str. N16961

Edit deposit information
CSGID target
IDP01486 
PDB Id
3IEB (NCBI MMDB
Authors
B.Nocek,N.Maltseva,J.Osipiuk,J.Stam,W.Anderson,A.Joachimiak 
Responsible person
Boguslaw Nocek 
Responsible lab
Argonne National Laboratory 
Deposition Date
Jul 22, 2009 
Release Date
Aug 18, 2009 

Annotation

Ligands

Ligand code Name Ligand type
GOL crystallization
MSE modified residue
175 3,5-dihydro-5-methylidene-4h-imidazol-4-on

Structure information

Unit cell parameters

Space Group
P 61 2 2  
Unit Cell

a=157.40Å, b=157.40Å, c=303.39Å
α=90.00, β=90.00, γ=120.00 
Solvent content
72.99  
Matthews coefficient
4.55  

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
40.00-2.10Å (2.15-2.10Å)  
Rall(%)
18.0 
Rwork(%)
17.8 (23.8) 
Rfree(%)
20.8 (28.3) 
Num. observed reflections
128158 (9346) 
Num. Rfree reflections
6407 (532) 
Completeness(%)
99.3 (99.9) 

Model parameters

Num Atoms
7840  
Num Waters
727  
Num Hetatoms
1130  
Model mean isotropic B factor
15.050Å2  
RMSD bond length
0.020Å  
RMSD bond angle
1.609°  
Filename uploaded
rcsb054304.pdb (uploaded on Aug 07, 2009 5:24 PM)  
Inserted
Aug 07, 2009