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Structure of IDP01801

Crystal Structure of Glutaredoxin 1 from Francisella tularensis

Edit deposit information
CSGID target
IDP01801 
PDB Id
3LGC (NCBI MMDB
Authors
N.Maltseva,Y.Kim,L.Papazisi,W.F.Anderson,A.Joachimiak 
Responsible person
Natalia Maltseva 
Responsible lab
Argonne National Laboratory 
Deposition Date
Jan 20, 2010 
Release Date
Feb 16, 2010 

Annotation

Description
Glutaredoxins, also known as thioltransferases (disulphide reductases), are small proteins with function of an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Similar to thioredoxin, glutaredoxin contains disulphide bond in the active center. It exists in either a reduced or an oxidized form and in the present structure two cysteine residues are in alternative conformation with one of them forming an intramolecular disulphide bond. 
Functional assignment
 

Ligands

Ligand code Name Ligand type
SO4
GOL
MSE modified residue

Structure information

Unit cell parameters

Space Group
P 61  
Unit Cell

a=66.44Å, b=66.44Å, c=63.12Å
α=90.00, β=90.00, γ=120.00 
Solvent content
68.04  
Matthews coefficient
3.85  

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
33.22-2.77Å (0.00-0.00Å)  
Rall(%)
17.7 
Rwork(%)
17.5 (0.0) 
Rfree(%)
22.3 (0.0) 
Num. observed reflections
4259 (0) 
Num. Rfree reflections
192 (0) 
Completeness(%)
99.6 (0.0) 

Model parameters

Num Atoms
806  
Num Waters
30  
Num Hetatoms
0  
Model mean isotropic B factor
51.690Å2  
RMSD bond length
0.014Å  
RMSD bond angle
1.462°  
RMSD dihedral angle
20.029°
 
Filename uploaded
dep2w.pdb (uploaded on Jan 20, 2010 12:53 PM)  
Inserted
Jan 20, 2010