Structure of IDP92102

CRYSTAL STRUCTURE OF THE ORNITHINE AMINOTRANSFERASE FROM TOXOPLASMA GONDII ME49 IN A COMPLEX WITH GABACULINE

Edit deposit information
CSGID target
IDP92102 
PDB Id
5DJ9 (NCBI MMDB
Authors
E.V.Filippova,G.Minasov,K.Flores,H.V.Le,R.B.Silverman,R.L.Mcleod,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid) 
Responsible person
Ekaterina Filippova 
Responsible lab
Northwestern University 
Deposition Date
Sep 01, 2015 
Release Date
Oct 05, 2016 

Annotation

Ligands

Ligand code Name Ligand type
SO4 crystallization
TRS Tris(hydroxymethyl)aminomethane crystallization
BTB 2-[bis-(2-hydroxy-ethyl)-amino]-2-hydroxymethyl-propane-1,3-diol crystallization
PXG 3-[o-phosphonopyridoxyl]--amino-benzoic acid biological

Structure information

Unit cell parameters

Space Group
P 1  
Unit Cell

a=56.26Å, b=60.89Å, c=63.50Å
α=100.83, β=92.38, γ=107.86 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
62.02-1.54Å (1.59-1.55Å)  
Rall(%)
16.0 
Rwork(%)
15.8 (21.7) 
Rfree(%)
19.0 (22.6) 
Num. observed reflections
109958 (7188) 
Num. Rfree reflections
5387 (375) 
Completeness(%)
95.7 (84.3) 

Model parameters

Num Atoms
6576  
Num Waters
726  
Num Hetatoms
846  
Model mean isotropic B factor
23.100Å2  
RMSD bond length
0.014Å  
RMSD bond angle
1.691°  
Filename uploaded
TgOAT-gaba_2.1_refmac17.pdb (uploaded on Aug 30, 2016 4:04 PM)  
Inserted
Aug 30, 2016