Structure of IDP95086

Crystal structure of macrolide 2(prime)-phosphotransferase MphH from Brachybacterium faecium in complex with GDP

Edit deposit information
CSGID target
IDP95086 
PDB Id
5UXC (NCBI MMDB
Authors
Stogios Pj, Skarina T, Wawrzak Z, Yim V, Savchenko A, Anderson Wf, Center For Structural Genomics Of Infectious Diseases (Csgid) 
Responsible person
Peter Stogios 
Responsible lab
University of Calgary 
Deposition Date
Feb 22, 2017 
Release Date
 

Annotation

Ligands

Ligand code Name Ligand type
MSE modified residue
MG crystallization
GDP biological
SO4 crystallization
ZIT crystallization
PO4 PHOSPHATE ION crystallization
CL crystallization
PE3 polyethylene glycol crystallization
GOL crystallization

Structure information

Unit cell parameters

Space Group
P 21 21 21  
Unit Cell

a=49.56Å, b=77.00Å, c=94.41Å
α=90.00, β=90.00, γ=90.00 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
40.24-1.72Å (1.76-1.72Å)  
Rall(%)
16.2 
Rwork(%)
16.0 (26.6) 
Rfree(%)
20.3 (34.9) 
Num. observed reflections
40926 (2610) 
Num. Rfree reflections
1997 (131) 
Completeness(%)
99.8 (100.0) 

Model parameters

Num Atoms
2288  
Num Waters
471  
Num Hetatoms
661  
Model mean isotropic B factor
26.320Å2  
RMSD bond length
0.015Å  
RMSD bond angle
2.016°  
RMSD dihedral angle
21.529°
 
Filename uploaded
GW0008_GTPan_az_APSx1_Feb12_2015_refine_10.pdb (uploaded on Feb 22, 2017 2:47 PM)  
Inserted
Feb 22, 2017