X-ray Structures

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Page 34 of 74, showing 20 records  out of 1467 total, starting on record 661 structures.
Click on the title of a structure below to see more information about that structure.

Target IDP52003

Title: The crystal structure of Papain-Like Protease of SARS CoV-2, C111S/D286N mutant, in complex with a Lys48-linked di-ubiquitin
Authors: Osipiuk, J., Tesar, C., Endres, M., Lanham, B.T., Wydorski, P., Fushman, D., Joachimiak, L., Joachimiak, A., Center for Structural Genomics of Infectious Diseases
PDB 7UV5 (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: zinc
Other ligands: ethylene diol
R: 13.9%
Rfree: 17.9%
Resolution: 1.45Å
Deposited: 2022-04-29
Released: 2022-05-11

Target CPX_52010_52016

Title: Crystal Structure of SARS-CoV-2 Nsp16/10 Heterodimer Apo-Form.
Authors: Minasov, G., Shuvalova, L., Brunzelle, J.S., Rosas-Lemus, M., Kiryukhina, O., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7ULT (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: zinc
Other ligands: , formate
R: 16.6%
Rfree: 18.8%
Resolution: 1.9Å
Deposited: 2022-04-05
Released: 2022-04-13

Target IDP52005

Title: The Crystal Structure of SARS-CoV-2 Omicron Mpro (P132H) in complex with masitinib
Authors: Tan, K., Maltseva, N.I., Endres, M.J., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7TVX (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with:
R: 18%
Rfree: 21.2%
Resolution: 2.09Å
Deposited: 2022-02-06
Released: 2022-02-16
Title: The Crystal Structure of SARS-CoV-2 Omicron Mpro (P132H) in complex with demethylated analog of masitinib
Authors: Tan, K., Maltseva, N.I., Endres, M.J., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7TVS (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with:
Other ligands:
R: 19.1%
Rfree: 22.5%
Resolution: 1.89Å
Deposited: 2022-02-05
Released: 2022-02-16

Target IDP52003

Title: Crystal structure of the ubiquitin-like domain 1 (Ubl1) of Nsp3 from SARS-CoV-2, form 2
Authors: Stogios, P.J., Skarina, T., Di Leo, R., Savchenko, A., Joachimiak, A., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7TI9 (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: chloride, glycerol
R: 22.3%
Rfree: 24.9%
Resolution: 2.73Å
Deposited: 2022-01-13
Released: 2022-01-26

Target IDP04712

Title: Crystal Structure of the Soluble Domain of the Putative OmpA -Family Membrane Protein YPO0514 from Yersinia pestis
Authors: Kim, Y., Tesar, C., Chhor, G., Clancy, S., Babnigg, G., Schneewind, O., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID
PDB 7THW (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: , calcium ion
R: 22.8%
Rfree: 26.9%
Resolution: 2.2Å
Deposited: 2022-01-12
Released:

Target IDP52003

Title: SUD-C and Ubl2 domains of SARS CoV-2 Nsp3 protein
Authors: Osipiuk, J., Jedrzejczak, R., Endres, M., Wydorski, P., Joachimiak, L., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7THH (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: , chloride, ethylene diol, hexaethylene glycol
R: 14.7%
Rfree: 19.1%
Resolution: 1.32Å
Deposited: 2022-01-11
Released: 2022-01-19

Target IDP64164

Title: Crystal Structure of the Pirin Family Protein Redox-sensitive Bicupin YhaK Bound to Copper Ion from Yersinia pestis
Authors: Kim, Y., Chhor, G., Endres, M., Babnigg, G., Schneewind, O., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7TFQ (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with:
Other ligands: ethylene diol, formate, succinic acid
R: 16.7%
Rfree: 19.6%
Resolution: 1.74Å
Deposited: 2022-01-07
Released: 2022-01-19
Title: Crystal Structure of the Pirin Family Protein Redox-sensitive Bicupin YhaK in the Presence of Fe Ion from Yersinia pestis
Authors: Kim, Y., Chhor, G., Endres, M., Babnigg, G., Schneewind, O., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7TG5 (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with:
Other ligands: chloride
R: 17.4%
Rfree: 20.8%
Resolution: 1.72Å
Deposited: 2022-01-07
Released: 2022-01-19
Title: Crystal Structure of the Pirin Family Protein Redox-sensitive Bicupin YhaK from Yersinia pestis
Authors: Kim, Y., Chhor, G., Endres, M., Babnigg, G., Schneewind, O., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7TE5 (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: magnesium
R: 17.5%
Rfree: 20.7%
Resolution: 1.85Å
Deposited: 2022-01-04
Released: 2022-01-12

Target IDP00115

Title: Crystal Structure of the YaeQ Family Protein VPA0551 from Vibrio parahaemolyticus
Authors: Kim, Y., Joachimak, A., Mulligan, R., Maltseva, N., Gu, M., CSGID
PDB 7TCB (PDBSUM) (Profunc) (GPSS) (MMDB)
R: 22.5%
Rfree: 26.5%
Resolution: 2.7Å
Deposited: 2021-12-23
Released:

Target IDP02752

Title: Crystal Structure of the Glutaredoxin 2 from Francisella tularensis
Authors: Kim, Y., Zhou, M., Grimshaw, S., Joachimiak,A., CSGID
PDB 7TBS (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: chloride, sulfate
R: 18.4%
Rfree: 21.7%
Resolution: 1.96Å
Deposited: 2021-12-22
Released:

Target IDP05678

Title: Crystal Structure of the PBP2_YvgL_like protein Lmo1041 from Listeria monocytogenes
Authors: Kim, Y., Maltseva, M., Grimshaw, S., Joachimiak, A., and CSGID
PDB 7TAV (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: calcium ion, chloride, glycerol, sulfate
R: 21.5%
Rfree: 25.1%
Resolution: 2.75Å
Deposited: 2021-12-21
Released:

Target IDP52003

Title: Crystal structure of the Nsp3 BSM (betacoronavirus-specific marker) domain from SARS-CoV-2
Authors: Stogios PJ, Skarina T, Di Leo R, Savchenko A, Joachimiak A, Satchell KJF, Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7T9W (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: chloride, glycerol
R: 26.3%
Rfree: 31.6%
Resolution: 2.2Å
Deposited: 2021-12-20
Released: 2021-12-29
Title: Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with PLP_Snyder608 inhibitor
Authors: Osipiuk, J., Tesar, C., Endres, M., Lisnyak, V., Maki, S., Taylor, C., Zhang, Y., Zhou, Z., Azizi, S.A., Jones, K., Kathayat, R., Snyder, S.A., Dickinson, B.C., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7SGU (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: unknown, zinc
Other ligands: chloride, formate
R: 16.8%
Rfree: 18.8%
Resolution: 1.79Å
Deposited: 2021-10-07
Released:
Title: Papain-Like Protease of SARS CoV-2 in complex with PLP_Snyder608 inhibitor
Authors: Osipiuk, J., Tesar, C., Endres, M., Lisnyak, V., Maki, S., Taylor, C., Zhang, Y., Zhou, Z., Azizi, S.A., Jones, K., Kathayat, R., Snyder, S.A., Dickinson, B.C., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7SGW (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: unknown, zinc
Other ligands: chloride
R: 17.8%
Rfree: 20.7%
Resolution: 1.95Å
Deposited: 2021-10-07
Released:
Title: Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with PLP_Snyder630 inhibitor
Authors: Osipiuk, J., Tesar, C., Endres, M., Lisnyak, V., Maki, S., Taylor, C., Zhang, Y., Zhou, Z., Azizi, S.A., Jones, K., Kathayat, R., Snyder, S.A., Dickinson, B.C., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7SGV (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: unknown, zinc
Other ligands: chloride
R: 18.2%
Rfree: 20.7%
Resolution: 2Å
Deposited: 2021-10-07
Released:
Title: Papain-Like Protease of SARS CoV-2 in Complex with Jun9-72-2 Inhibitor
Authors: Osipiuk, J., Tesar, C., Endres, M., Wang, J., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7SDR (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: unknown, zinc
Other ligands: chloride, ethylene diol, glycerol
R: 17.5%
Rfree: 21.2%
Resolution: 2.72Å
Deposited: 2021-09-29
Released:

Target IDP98885

Title: The crystal structure of human ISG15
Authors: Osipiuk, J., Tesar, C., Jedrzejczak, R., Endres, M., Wydorski, P., Joachimiak, L., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7S6P (PDBSUM) (Profunc) (GPSS) (MMDB)
R: 22.3%
Rfree: 26.8%
Resolution: 2.15Å
Deposited: 2021-09-14
Released: 2021-09-22

Target IDP52003

Title: Papain-Like Protease of SARS CoV-2 in complex with Jun9-84-3 inhibitor
Authors: Osipiuk, J., Tesar, C., Endres, M., Wang, J., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7RZC (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: unknown, zinc
Other ligands: chloride, ethylene diol
R: 17.9%
Rfree: 21.2%
Resolution: 2.04Å
Deposited: 2021-08-27
Released: 2021-09-08
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