X-ray Structures

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    Title: SARS

Page 1 of 4, showing 20 records  out of 68 total, starting on record 1 structures.
Click on the title of a structure below to see more information about that structure.

Target IDP52003

Title: Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with PLP_Snyder608 inhibitor
Authors: Osipiuk, J., Tesar, C., Endres, M., Lisnyak, V., Maki, S., Taylor, C., Zhang, Y., Zhou, Z., Azizi, S.A., Jones, K., Kathayat, R., Snyder, S.A., Dickinson, B.C., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7SGU (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: , unknown
Other ligands: , formate
R: 16.8%
Rfree: 18.8%
Resolution: 1.79Å
Deposited: 2021-10-07
Released:
Title: Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with PLP_Snyder630 inhibitor
Authors: Osipiuk, J., Tesar, C., Endres, M., Lisnyak, V., Maki, S., Taylor, C., Zhang, Y., Zhou, Z., Azizi, S.A., Jones, K., Kathayat, R., Snyder, S.A., Dickinson, B.C., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7SGV (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: , unknown
Other ligands:
R: 18.2%
Rfree: 20.7%
Resolution: 2Å
Deposited: 2021-10-07
Released:
Title: Papain-Like Protease of SARS CoV-2 in complex with PLP_Snyder608 inhibitor
Authors: Osipiuk, J., Tesar, C., Endres, M., Lisnyak, V., Maki, S., Taylor, C., Zhang, Y., Zhou, Z., Azizi, S.A., Jones, K., Kathayat, R., Snyder, S.A., Dickinson, B.C., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7SGW (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: , unknown
Other ligands:
R: 17.8%
Rfree: 20.7%
Resolution: 1.95Å
Deposited: 2021-10-07
Released:
Title: Papain-Like Protease of SARS CoV-2 in Complex with Jun9-72-2 Inhibitor
Authors: Osipiuk, J., Tesar, C., Endres, M., Wang, J., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7SDR (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: , unknown
Other ligands: , ,
R: 17.5%
Rfree: 21.2%
Resolution: 2.72Å
Deposited: 2021-09-29
Released:
Title: Papain-Like Protease of SARS CoV-2 in complex with Jun9-84-3 inhibitor
Authors: Osipiuk, J., Tesar, C., Endres, M., Wang, J., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7RZC (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: , unknown
Other ligands: ,
R: 17.9%
Rfree: 21.2%
Resolution: 2.04Å
Deposited: 2021-08-27
Released: 2021-09-08
Title: Crystal structure of the Nsp3 Y3 domain from SARS-CoV-2
Authors: Stogios PJ, Skarina T, Chang C, Di Leo R, Savchenko A, Joachimiak A, Satchell KJF, Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7RQG (PDBSUM) (Profunc) (GPSS) (MMDB)
R: 19.9%
Rfree: 24.2%
Resolution: 2.17Å
Deposited: 2021-08-06
Released: 2021-08-18
Title: Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with a Lys48-linked di-ubiquitin
Authors: Osipiuk, J., Tesar, C., Endres, M., Lanham, B.T., Wydorski, P., Fushman, D., Joachimiak, L., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7RBR (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with:
Other ligands: ,
R: 18.9%
Rfree: 22.8%
Resolution: 1.88Å
Deposited: 2021-07-06
Released: 2021-09-29
Title: Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with human ISG15
Authors: Osipiuk, J., Tesar, C., Jedrzejczak, R., Endres, M., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7RBS (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with:
R: 19.7%
Rfree: 23.6%
Resolution: 2.98Å
Deposited: 2021-07-06
Released: 2021-09-29

Target IDP51003

Title: Crystal Structure of Human Fab S24-1564 in the complex with the N-teminal Domain of Nucleocapsid protein from SARS CoV-2
Authors: Kim, Y., Maltseva, N., Tesar, C., Jedrzejczak, R., Dugan, H., Stamper, C., Wilson, P., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7N3D (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: ,
R: 15.9%
Rfree: 19%
Resolution: 1.52Å
Deposited: 2021-05-31
Released: 2021-07-07
Title: Crystal Structure of Human Fab S24-202 in the complex with the N-teminal Domain of Nucleocapsid protein from SARS CoV-2
Authors: Kim, Y., Maltseva, N., Tesar, C., Jedrzejczak, R., Dugan, H., Stamper, C., Wilson, P., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7N3C (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: , ,
R: 18.1%
Rfree: 21%
Resolution: 1.82Å
Deposited: 2021-05-31
Released: 2021-07-07

Target IDP52003

Title: The crystal structure of Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with ebselen
Authors: Osipiuk, J., Tesar, C., Endres, M., Maltseva, N., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7M1Y (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: , ~{n}-phenyl-2-selanyl-benzamide
Other ligands: , , , , formate
R: 18.6%
Rfree: 21.3%
Resolution: 2.02Å
Deposited: 2021-03-15
Released: 2021-03-24
Title: Crystal structure of the nucleic acid binding domain (NAB) of Nsp3 from SARS-CoV-2
Authors: Stogios PJ, Skarina T, Di Leo R, Savchenko A, Joachimiak A, Satchell KJF, Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7LGO (PDBSUM) (Profunc) (GPSS) (MMDB)
R: 26.4%
Rfree: 31.8%
Resolution: 2.45Å
Deposited: 2021-01-20
Released: 2021-01-27

Target CPX_52010_52016

Title: Crystal Structure of SARS-CoV-2 Nsp16/10 Heterodimer in Complex with (m7GpppA2m)pUpUpApApA (Cap-1), S-Adenosyl-L-homocysteine (SAH) and Manganese (Mn).
Authors: Minasov, G., Shuvalova, L., Rosas-Lemus, M., Kiryukhina, O., Brunzelle, J.S., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID).
PDB 7L6R (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: , , 2'-o-methyl-adenosine-5'-monophosphate, 7n-methyl-8-hydroguanosine-5'-diphosphate, unknown, unknown
Other ligands: , , , beta-d-fructopyranose
R: 15.1%
Rfree: 16.6%
Resolution: 1.98Å
Deposited: 2020-12-23
Released: 2021-01-06
Title: Crystal Structure of SARS-CoV-2 Nsp16/10 Heterodimer in Complex with (m7GpppA2m)pUpUpApApA (Cap-1), S-Adenosyl-L-homocysteine (SAH) and two Magnesium (Mg) ions.
Authors: Minasov, G., Shuvalova, L., Rosas-Lemus, M., Kiryukhina, O., Brunzelle, J.S., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7L6T (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: , , , 2'-o-methyl-adenosine-5'-monophosphate, 7n-methyl-8-hydroguanosine-5'-diphosphate, formate, unknown, unknown
Other ligands: , , beta-d-fructopyranose
R: 14.2%
Rfree: 16.2%
Resolution: 1.78Å
Deposited: 2020-12-23
Released: 2021-01-06

Target IDP52005

Title: The crystal structure of SARS-CoV-2 Main Protease in complex with demethylated analog of masitinib
Authors: K.Tan, N.I.Maltseva, R.P.Jedrzejczak, A.Joachimiak, Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7L5D (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: mastinib analog
Other ligands: ,
R: 17.8%
Rfree: 20.1%
Resolution: 1.58Å
Deposited: 2020-12-21
Released: 2020-12-30
Title: The crystal structure of SARS-CoV-2 Main Protease with the formation of Cys145-1H-indole-5-carboxylate
Authors: K.Tan, N.I.Maltseva, R.P.Jedrzejczak, A.Joachimiak, Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7KYU (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with:
Other ligands:
R: 16.2%
Rfree: 18.7%
Resolution: 1.48Å
Deposited: 2020-12-08
Released: 2020-12-16

Target IDP52003

Title: The crystal structure of Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with PLP_Snyder441
Authors: Osipiuk, J., Tesar, C., Endres, M., Lisnyak, V., Maki, S., Taylor, C., Zhang, Y., Zhou, Z., Azizi, S.A., Jones, K., Kathayat, R., Snyder, S.A., Dickinson, B.C., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7KRX (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: , 3-amino-2-methyl-N-[(1R)-1-(naphthalen-1-yl)ethyl]benzamide
Other ligands: , , Unknown atom
R: 21.2%
Rfree: 24.9%
Resolution: 2.72Å
Deposited: 2020-11-20
Released:

Target CPX_52010_52016

Title: Room Temperature Structure of SARS-CoV-2 Nsp10/16 Methyltransferase in a Complex with Cap-0 and SAM Determined by Pink-Beam Serial Crystallography
Authors: Wilamowski, M., Sherrell, D.A., Minasov, G., Shuvalova, L., Lavens, A., Henning, R., Maltseva, N., Rosas-Lemus, M., Kim, Y., Satchell, K.J.F., Srajer, V., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7KOA (PDBSUM) (Profunc) (GPSS) (MMDB)
R: 23.6%
Rfree: 27.7%
Resolution: 2.4Å
Deposited: 2020-11-17
Released: 2020-11-18

Target IDP52003

Title: The crystal structure of Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with PLP_Snyder494
Authors: Osipiuk, J., Tesar, C., Endres, M., Lisnyak, V., Maki, S., Taylor, C., Zhang, Y., Zhou, Z., Azizi, S.A., Jones, K., Kathayat, R., Snyder, S.A., Dickinson, B.C., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7KOJ (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: , unknown
Other ligands: , , MES, Unknown atom
R: 18.4%
Rfree: 20.3%
Resolution: 2.02Å
Deposited: 2020-11-09
Released:
Title: The crystal structure of Papain-Like Protease of SARS CoV-2 in complex with PLP_Snyder496
Authors: Osipiuk, J., Tesar, C., Endres, M., Lisnyak, V., Maki, S., Taylor, C., Zhang, Y., Zhou, Z., Azizi, S.A., Jones, K., Kathayat, R., Snyder, S.A., Dickinson, B.C., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7KOL (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: , unknown
Other ligands: , MES
R: 18.9%
Rfree: 20.6%
Resolution: 2.58Å
Deposited: 2020-11-09
Released:
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