Structure of IDP91330

2.7 Angstrom Crystal Structure of ABC transporter ATPase from Vibrio vulnificus in Complex with Adenylyl-imidodiphosphate (AMP-PNP).

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CSGID target
IDP91330 
PDB Id
5D6A (NCBI MMDB) 
Authors
'G.Minasov,Z.Wawrzak,L.Shuvalova,I.Dubrovska,K.Flores,S.Grimshaw,K.Kwon,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)' 
Responsible person
George Minasov 
Responsible lab
Northwestern University 
Deposition Date
Aug 11, 2015 
Release Date
Aug 26, 2015 

Annotation

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Ligands

Ligand code Name Ligand type
NA crystallization
ANP phosphoaminophosphonic acid-adenylate ester biological
175 3,5-dihydro-5-methylidene-4h-imidazol-4-on

Structure information

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Unit cell parameters

Space Group
P 31 2 1  
Unit Cell

a=104.96Å, b=104.96Å, c=85.35Å
α=90.00, β=90.00, γ=120.00 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
28.55-2.70Å (2.77-2.70Å)  
Rall(%)
20.0 
Rwork(%)
19.4 (25.0) 
Rfree(%)
25.6 (32.4) 
Num. observed reflections
15222 (1098) 
Num. Rfree reflections
1537 (111) 
Completeness(%)
99.8 (99.6) 

Model parameters

Num Atoms
4201  
Num Waters
84  
Num Hetatoms
228  
Model mean isotropic B factor
55.710Å2  
RMSD bond length
0.004Å  
RMSD bond angle
1.051°  
Filename uploaded
5D6A.pdb (uploaded on Aug 31, 2015 2:00 PM)  
Inserted
Aug 31, 2015