Structure of IDP95418

Crystal structure of an aminoglycoside acetyltransferase HMB0020 from an uncultured soil metagenomic sample in complex with coenzyme A

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CSGID target
IDP95418 
PDB Id
5F48 (NCBI MMDB) 
Authors
'Z.Xu,T.Skarina,P.J.Stogios,V.Yim,A.Savchenko,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)' 
Responsible person
Peter Stogios 
Responsible lab
University of Calgary 
Deposition Date
Dec 03, 2015 
Release Date
Dec 30, 2015 

Annotation

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Ligands

Ligand code Name Ligand type
175 3,5-dihydro-5-methylidene-4h-imidazol-4-on biological
MG magnesium crystallization
CL chloride crystallization

Structure information

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Unit cell parameters

Space Group
P 1 21 1  
Unit Cell

a=46.13Å, b=80.19Å, c=53.93Å
α=90.00, β=91.97, γ=90.00 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
23.62-1.95Å (2.02-1.95Å)  
Rall(%)
19.2 
Rwork(%)
19.0 (31.1) 
Rfree(%)
23.5 (36.0) 
Num. observed reflections
29340 (2554) 
Num. Rfree reflections
1472 (135) 
Completeness(%)
97.5 (94.0) 

Model parameters

Num Atoms
2536  
Num Waters
405  
Num Hetatoms
520  
Model mean isotropic B factor
33.100Å2  
RMSD bond length
0.018Å  
RMSD bond angle
1.243°  
RMSD dihedral angle
20.165°
 
Filename uploaded
5F48.pdb (uploaded on Jan 06, 2016 1:33 PM)  
Inserted
Dec 04, 2015