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Structure of IDP01530

Crystal structure of a putative succinate-semialdehyde dehydrogenase from Salmonella typhimurium LT2

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CSGID target
IDP01530 
PDB Id
3ETF (NCBI MMDB) 
Authors
'J.S.Brunzelle,E.Evdokimova,M.Kudritska,Z.Wawrzak,W.F.Anderson,A.Savchenk,Center For Structural Genomics Of Infectious Diseases (Csgid)' 
Responsible person
Joseph Brunzelle 
Responsible lab
Northwestern University 
Deposition Date
Oct 07, 2008 
Release Date
Nov 04, 2008 

Annotation

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Description
This enzyme belongs to the family of oxidoreductases, specifically those acting on the aldehyde or oxo group of donor with NAD+ or NADP+ as acceptor. The systematic name of this enzyme class is succinate-semialdehyde:NAD+ oxidoreductase.  
Functional assignment
 

Ligands

Ligand code Name Ligand type
175 3,5-dihydro-5-methylidene-4h-imidazol-4-on

Structure information

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Unit cell parameters

Space Group
P 32 2 1  
Unit Cell

a=133.88Å, b=133.88Å, c=247.03Å
α=90.00, β=90.00, γ=120.00 
Solvent content
61.72  
Matthews coefficient
3.21  

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
116.25-1.85Å (1.90-1.85Å)  
Rall(%)
16.8 
Rwork(%)
16.7 (19.4) 
Rfree(%)
19.4 (23.8) 
Num. observed reflections
217377 (15822) 
Num. Rfree reflections
10868 (787) 
Completeness(%)
99.7 (99.0) 

Model parameters

Num Atoms
15907  
Num Waters
1985  
Num Hetatoms
0  
Model mean isotropic B factor
22.946Å2  
RMSD bond length
0.013Å  
RMSD bond angle
1.404°  
Filename uploaded
STM1524apo.pdb (uploaded on Oct 28, 2008 1:09 PM)  
Inserted
Oct 28, 2008