Structure of IDP96847

2.25 Angstrom Resolution Crystal Structure of 6-phospho-alpha-glucosidase from Klebsiella pneumoniae in Complex with NAD and Mn2+.

Edit deposit information
CSGID target
IDP96847 
PDB Id
6DVV (NCBI MMDB
Authors
'G.Minasov,L.Shuvalova,O.Kiryukhina,M.Endres,K.J.F.Satchell,A.Joachimiak,Center For Structural Genomics Of Infectious Diseases (Csgid)' 
Responsible person
George Minasov 
Responsible lab
Northwestern University 
Deposition Date
Jun 25, 2018 
Release Date
Jul 18, 2018 

Annotation

Ligands

Ligand code Name Ligand type
MSE modified residue
NAD biological
MN unknown biological
SO4 sulfate molecule crystallization
CL unknown crystallization
PEG polyethylene glycol crystallization
GOL glycerol crystallization

Structure information

Unit cell parameters

Space Group
P 32 2 1  
Unit Cell

a=86.03Å, b=86.03Å, c=230.78Å
α=90.00, β=90.00, γ=120.00 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
28.99-2.25Å (2.31-2.25Å)  
Rall(%)
16.7 
Rwork(%)
16.4 (23.4) 
Rfree(%)
21.9 (27.1) 
Num. observed reflections
47782 (3451) 
Num. Rfree reflections
2532 (204) 
Completeness(%)
99.7 (99.5) 

Model parameters

Num Atoms
6616  
Num Waters
370  
Num Hetatoms
757  
Model mean isotropic B factor
59.290Å2  
RMSD bond length
0.008Å  
RMSD bond angle
1.392°  
Filename uploaded
D_1000235318_model-annotate_P1.pdb (uploaded on Jul 14, 2018 10:21 PM)  
Inserted
Jul 14, 2018