Structure of IDP07475

Crystal Structure of the Beta Lactamase Class A penP from Bacillus subtilis

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CSGID target
IDP07475 
PDB Id
6NI1 (NCBI MMDB) 
Authors
'Y.Kim,N.Maltseva,M.Endres,A.Joachimiak,Center For Structural Genomics Of Infectious Diseases (Csgid)' 
Responsible person
Youngchang Kim 
Responsible lab
Argonne National Laboratory 
Deposition Date
Dec 25, 2018 
Release Date
Jan 30, 2019 

Annotation

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Ligands

Ligand code Name Ligand type
EDO ethylene diol crystallization
FMT formate crystallization

Structure information

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Unit cell parameters

Space Group
P 65  
Unit Cell

a=87.85Å, b=87.85Å, c=149.85Å
α=90.00, β=90.00, γ=120.00 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
43.92-1.89Å (1.93-1.89Å)  
Rall(%)
15.7 
Rwork(%)
15.6 (19.7) 
Rfree(%)
19.1 (23.4) 
Num. observed reflections
54089 (2576) 
Num. Rfree reflections
2628 (110) 
Completeness(%)
99.4 (90.0) 

Model parameters

Num Atoms
4185  
Num Waters
319  
Num Hetatoms
350  
Model mean isotropic B factor
38.100Å2  
RMSD bond length
0.009Å  
RMSD bond angle
0.926°  
RMSD dihedral angle
11.64°
 
Filename uploaded
dep.pdb (uploaded on Jan 24, 2019 12:35 PM)  
Inserted
Jan 24, 2019