Structure of IDP95542

Crystal structure of Sec4p, a Rab family GTPase from Candida albicans

Edit deposit information
CSGID target
IDP95542 
PDB Id
6O62 (NCBI MMDB
Authors
Stogios, P.J., Skarina, T., Di Leo, R., Savchenko, A., Center For Structural Genomics Of Infectious Diseases (Csgid) 
Responsible person
Peter Stogios 
Responsible lab
University of Calgary 
Deposition Date
Mar 04, 2019 
Release Date
 

Annotation

Ligands

Ligand code Name Ligand type
GDP GUANOSINE-5''-DIPHOSPHATE biological

Structure information

Unit cell parameters

Space Group
C 1 2 1  
Unit Cell

a=96.30Å, b=38.08Å, c=43.12Å
α=90.00, β=105.09, γ=90.00 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
24.04-1.88Å (2.06-1.88Å)  
Rall(%)
25.9 
Rwork(%)
25.7 (30.9) 
Rfree(%)
31.5 (40.5) 
Num. observed reflections
12386 (2630) 
Num. Rfree reflections
619 (138) 
Completeness(%)
94.0 (89.0) 

Model parameters

Num Atoms
1364  
Num Waters
168  
Num Hetatoms
196  
Model mean isotropic B factor
27.860Å2  
RMSD bond length
0.003Å  
RMSD bond angle
0.536°  
RMSD dihedral angle
20.43°
 
Filename uploaded
CAA0061_1_184_Wallberg_Dec7_2018_refine_19.pdb (uploaded on Mar 08, 2019 9:06 AM)  
Inserted
Mar 08, 2019