Structure of IDP97147

Crystal Structure of DNase I Domain of Ribonuclease E from Vibrio cholerae

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CSGID target
IDP97147 
PDB Id
6X2D (NCBI MMDB) 
Authors
Minasov, G., Shuvalova, L., Kiryukhina, O., Dubrovska, I., Wiersum, G., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID) 
Responsible person
George Minasov 
Responsible lab
Northwestern University 
Deposition Date
May 20, 2020 
Release Date
Jun 10, 2020 

Annotation

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Ligands

Ligand code Name Ligand type
MSE modified residue
IOD crystallization

Structure information

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Unit cell parameters

Space Group
P 1 21 1  
Unit Cell

a=40.61Å, b=58.81Å, c=47.05Å
α=90.00, β=108.16, γ=90.00 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
29.41-1.85Å (1.90-1.85Å)  
Rall(%)
20.9 
Rwork(%)
20.7 (24.9) 
Rfree(%)
24.3 (25.9) 
Num. observed reflections
17846 (1235) 
Num. Rfree reflections
892 (67) 
Completeness(%)
98.9 (93.8) 

Model parameters

Num Atoms
1694  
Num Waters
73  
Num Hetatoms
116  
Model mean isotropic B factor
43.740Å2  
RMSD bond length
0.005Å  
RMSD bond angle
1.292°  
Filename uploaded
6x2d.pdb (uploaded on Jun 10, 2020 2:19 PM)  
Inserted
Jun 10, 2020