Structure of IDP06558

Crystal Structure of Metallo Beta Lactamase from Hirschia baltica in Complex with Succinate

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CSGID target
IDP06558 
PDB Id
6V5M (NCBI MMDB) 
Authors
Maltseva, N., Kim, Y., Clancy, S., Endres, M., Mulligan, R., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID) 
Responsible person
Natalia Maltseva 
Responsible lab
Argonne National Laboratory 
Deposition Date
Dec 04, 2019 
Release Date
Dec 25, 2019 

Annotation

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Ligands

Ligand code Name Ligand type
ZN zinc biological
SIN succinic acid crystallization
EDO ethylene diol crystallization
FMT formate crystallization
BTB 2-[bis-(2-hydroxy-ethyl)-amino]-2-hydroxymethyl-propane-1,3-diol crystallization

Structure information

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Unit cell parameters

Space Group
H 3 2  
Unit Cell

a=77.61Å, b=77.61Å, c=241.88Å
α=90.00, β=90.00, γ=120.00 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
40.31-1.50Å (1.53-1.50Å)  
Rall(%)
14.3 
Rwork(%)
14.2 (25.4) 
Rfree(%)
16.7 (30.6) 
Num. observed reflections
47667 (2458) 
Num. Rfree reflections
2426 (2572) 
Completeness(%)
99.4 (94.1) 

Model parameters

Num Atoms
1801  
Num Waters
197  
Num Hetatoms
271  
Model mean isotropic B factor
25.720Å2  
RMSD bond length
0.011Å  
RMSD bond angle
1.129°  
RMSD dihedral angle
22.738°
 
Filename uploaded
14Znimipensoak_refine_24.pdb (uploaded on Jul 06, 2020 2:47 PM)  
Inserted
Jul 06, 2020