Structure of IDP52003

The crystal structure of papain-like protease of SARS CoV-2

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CSGID target
IDP52003 
PDB Id
6W9C (NCBI MMDB) 
Authors
Osipiuk, J., Jedrzejczak, R., Tesar, C., Endres, M., Stols, L., Babnigg, G., Kim, Y., Michalska, K., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID) 
Responsible person
Jerzy Osipiuk 
Responsible lab
Argonne National Laboratory 
Deposition Date
Mar 22, 2020 
Release Date
Apr 01, 2020 

Annotation

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Ligands

Ligand code Name Ligand type
ZN zinc biological
CL chloride crystallization

Structure information

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Unit cell parameters

Space Group
C 1 2 1  
Unit Cell

a=190.79Å, b=110.28Å, c=64.07Å
α=90.00, β=96.22, γ=90.00 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
43.68-2.70Å (2.77-2.70Å)  
Rall(%)
23.9 
Rwork(%)
23.5 (33.3) 
Rfree(%)
30.9 (39.2) 
Num. observed reflections
20797 (1015) 
Num. Rfree reflections
1039 (38) 
Completeness(%)
57.1 (37.5) 

Model parameters

Num Atoms
7392  
Num Waters
1  
Num Hetatoms
5  
Model mean isotropic B factor
54.050Å2  
RMSD bond length
0.004Å  
RMSD bond angle
1.316°  
Filename uploaded
6w9c.pdb (uploaded on Aug 17, 2020 10:36 AM)  
Inserted
Aug 17, 2020