Structure of IDP52003

Crystal structure of the Nsp3 BSM (betacoronavirus-specific marker) domain from SARS-CoV-2

Edit deposit information
CSGID target
IDP52003 
PDB Id
7T9W (NCBI MMDB
Authors
Stogios PJ, Skarina T, Di Leo R, Savchenko A, Joachimiak A, Satchell KJF, Center for Structural Genomics of Infectious Diseases (CSGID) 
Responsible person
Peter Stogios 
Responsible lab
University of Calgary 
Deposition Date
Dec 20, 2021 
Release Date
Dec 29, 2021 

Annotation

Ligands

Ligand code Name Ligand type
CL crystallization
GOL glycerol crystallization

Structure information

Unit cell parameters

Space Group
P 43  
Unit Cell

a=157.46Å, b=157.46Å, c=79.62Å
α=90.00, β=90.00, γ=90.00 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
29.42-2.20Å (2.26-2.20Å)  
Rall(%)
26.3 
Rwork(%)
26.2 (37.6) 
Rfree(%)
31.6 (40.2) 
Num. observed reflections
96331 (6442) 
Num. Rfree reflections
1916 (124) 
Completeness(%)
95.5 (86.0) 

Model parameters

Num Atoms
10879  
Num Waters
972  
Num Hetatoms
1004  
Model mean isotropic B factor
56.070Å2  
RMSD bond length
0.003Å  
RMSD bond angle
0.535°  
RMSD dihedral angle
16.441°
 
Filename uploaded
7t9w.pdb (uploaded on Dec 29, 2021 8:47 AM)  
Inserted
Dec 22, 2021