Structure of IDP05678

Crystal Structure of the PBP2_YvgL_like protein Lmo1041 from Listeria monocytogenes

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CSGID target
IDP05678 
PDB Id
7TAV (NCBI MMDB) 
Authors
Kim, Y., Maltseva, M., Grimshaw, S., Joachimiak, A., and CSGID 
Responsible person
Youngchang Kim 
Responsible lab
Argonne National Laboratory 
Deposition Date
Dec 21, 2021 
Release Date
 

Annotation

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Ligands

Ligand code Name Ligand type
GOL glycerol crystallization
CA calcium ion crystallization
SO4 sulfate crystallization
CL chloride crystallization

Structure information

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Unit cell parameters

Space Group
P 32  
Unit Cell

a=113.72Å, b=113.72Å, c=114.60Å
α=90.00, β=90.00, γ=120.00 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
37.22-2.75Å (2.81-2.75Å)  
Rall(%)
21.5 
Rwork(%)
21.3 (30.1) 
Rfree(%)
25.1 (34.8) 
Num. observed reflections
44727 (2390) 
Num. Rfree reflections
2343 (104) 
Completeness(%)
98.9 (89.0) 

Model parameters

Num Atoms
10367  
Num Waters
36  
Num Hetatoms
97  
Model mean isotropic B factor
57.750Å2  
RMSD bond length
0.001Å  
RMSD bond angle
0.378°  
RMSD dihedral angle
13.35°
 
Filename uploaded
idp5678_refine_5.pdb (uploaded on Dec 23, 2021 11:08 AM)  
Inserted
Dec 23, 2021