Structure of IDP96280

Crystal structure of ECL_RS08780, putative sugar transport system periplasmic sugar-binding protein

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CSGID target
IDP96280 
PDB Id
7V09 (NCBI MMDB) 
Authors
Stogios, P.J., Skarina, T., Mesa, N., Di Leo, R., Savchenko, A., Joachimiak, A., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID) 
Responsible person
Peter Stogios 
Responsible lab
University of Calgary 
Deposition Date
May 10, 2022 
Release Date
May 18, 2022 

Annotation

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Ligands

Ligand code Name Ligand type
MG magnesium biological

Structure information

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Unit cell parameters

Space Group
P 1 21 1  
Unit Cell

a=69.96Å, b=67.62Å, c=86.66Å
α=90.00, β=104.22, γ=90.00 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
19.86-2.00Å (2.04-2.00Å)  
Rall(%)
25.2 
Rwork(%)
25.0 (31.9) 
Rfree(%)
29.6 (38.8) 
Num. observed reflections
53603 (2592) 
Num. Rfree reflections
2631 (140) 
Completeness(%)
96.2 (94.0) 

Model parameters

Num Atoms
6205  
Num Waters
540  
Num Hetatoms
552  
Model mean isotropic B factor
34.560Å2  
RMSD bond length
0.002Å  
RMSD bond angle
0.448°  
RMSD dihedral angle
15.87°
 
Filename uploaded
7v09.pdb (uploaded on May 18, 2022 10:32 AM)  
Inserted
May 18, 2022