Structure of IDP52003

The crystal structure of Papain-Like Protease of SARS CoV-2, C111S/D286N mutant, in complex with a Lys48-linked di-ubiquitin

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CSGID target
IDP52003 
PDB Id
7UV5 (NCBI MMDB) 
Authors
Osipiuk, J., Tesar, C., Endres, M., Lanham, B.T., Wydorski, P., Fushman, D., Joachimiak, L., Joachimiak, A., Center for Structural Genomics of Infectious Diseases  
Responsible person
Jerzy Osipiuk 
Responsible lab
Argonne National Laboratory 
Deposition Date
Apr 29, 2022 
Release Date
May 11, 2022 

Annotation

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Ligands

Ligand code Name Ligand type
ZN zinc biological
EDO ethylene diol crystallization

Structure information

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Unit cell parameters

Space Group
C 1 2 1  
Unit Cell

a=148.15Å, b=50.09Å, c=71.87Å
α=90.00, β=112.19, γ=90.00 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
36.66-1.45Å (1.49-1.45Å)  
Rall(%)
13.9 
Rwork(%)
13.6 (29.0) 
Rfree(%)
17.9 (33.1) 
Num. observed reflections
85733 (5975) 
Num. Rfree reflections
4200 (305) 
Completeness(%)
99.0 (93.8) 

Model parameters

Num Atoms
3497  
Num Waters
355  
Num Hetatoms
372  
Model mean isotropic B factor
37.800Å2  
RMSD bond length
0.010Å  
RMSD bond angle
1.519°  
Filename uploaded
y3_bg14u2_refmac1.pdb (uploaded on May 23, 2022 11:10 AM)  
Inserted
May 23, 2022