Structure of IDP95756

Crystal structure of dihydropteroate synthase (folP-SMZ_B27) from soil uncultured bacterium in complex with 6-hydroxymethyl-7,8-dihydropterin pyrophosphate

Edit deposit information
CSGID target
IDP95756 
PDB Id
8D5G (NCBI MMDB
Authors
Stogios PJ, Skarina T, Di Leo R, Savchenko A, Joachimiak A, Satchell KJF, Center for Structural Genomics of Infectious Diseases (CSGID) 
Responsible person
Peter Stogios 
Responsible lab
University of Calgary 
Deposition Date
Jun 04, 2022 
Release Date
Jun 15, 2022 

Annotation

Ligands

Ligand code Name Ligand type
HH2 biological
CL crystallization

Structure information

Unit cell parameters

Space Group
P 64 2 2  
Unit Cell

a=101.54Å, b=101.54Å, c=207.01Å
α=90.00, β=90.00, γ=120.00 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
24.82-2.78Å (2.88-2.78Å)  
Rall(%)
20.8 
Rwork(%)
20.6 (31.7) 
Rfree(%)
24.6 (27.4) 
Num. observed reflections
17633 (2153) 
Num. Rfree reflections
888 (118) 
Completeness(%)
96.2 (75.0) 

Model parameters

Num Atoms
4160  
Num Waters
108  
Num Hetatoms
158  
Model mean isotropic B factor
52.390Å2  
RMSD bond length
0.002Å  
RMSD bond angle
0.493°  
RMSD dihedral angle
15.661°
 
Filename uploaded
8d5g.pdb (uploaded on Jun 15, 2022 8:55 AM)  
Inserted
Jun 05, 2022