Mg2+ ion |
Site type |
Inner-sphere ligands |
Outer-sphere ligands |
---|
PDB ID |
Mg2+ ID |
Oph |
Or |
Ob+Nb |
Water |
Other |
Pout |
Rout |
Bout |
1kd1 |
A8030 |
cis-2Oph |
U:A1748(OP1), U:A1749(OP2) |
|
|
A3635, A7761, A7762, A7772 |
|
G:A2585, G:A2584 |
|
|
1kd1 |
A8048 |
cis-2Oph |
A:A2746(OP2), G:A2750(OP2) |
|
|
A5872, A6258, A7872, A7910 |
|
C:A2745, U:A2749 |
|
|
1kd1 |
A8061 |
cis-2Oph |
A:A1369(OP2), U:A2650(OP1) |
|
|
A7826, A7827, A7828, A9814 |
|
A:A2649 |
U:A1371 |
|
1kd1 |
A8080 |
cis-2Oph |
A:A1684(OP2), U:A1724(OP2) |
|
|
A4200, A4483, A7843, A7896 |
|
C:A1431 |
A:A1691 |
U:A1722, A:A1691 |
1kd1 |
A8002 |
cis-2Oph·Ob |
A:A2483(OP1), C:A2534(OP1) |
|
G:A627(O6) |
A4319, A7752, A7753 |
|
|
U:A625 |
U:A626 |
1kd1 |
A8079 |
cis-2Oph·Nb |
A:A167(OP1), C:A168(OP2) |
|
A:A165(N7) |
A3606, A3612, A3624 |
|
G:A164, A:A165 |
|
G:A164 |
1kd1 |
A8089 |
cis-2Oph·Nb |
A:A516(OP1), U:A517(OP2) |
|
G:A518(N7) |
A7848, A7898, A7899 |
|
|
|
|
1kd1 |
A8001 |
fac-3Oph |
A:A2483(OP2), C:A2533(OP2), C:A2534(OP2) |
|
|
A3611, A7774, A9173 |
|
U:A2484 |
A:A2532 |
|
1kd1 |
A8003 |
fac-3Oph |
A:A876(OP2), G:A877(OP2), A:A2624(OP1) |
|
|
A3662, C8511, C8536 |
|
|
|
|
1kd1 |
A8006 |
fac-3Oph |
U:A821(OP2), C:A822(OP2), G:A854(OP1) |
|
|
A3613, A3750, A9805 |
|
G:A856, U:A855 |
|
|
1kd1 |
A8016 |
fac-3Oph |
A:A1504(OP1), A:A1678(OP1), C:A1679(OP2) |
|
|
A3742, A7777, A7778 |
|
|
|
|
1kd1 |
A8005 |
mer-3Oph |
A:A1836(OP1), U:A1838(OP1), A:A1839(OP2) |
|
|
A3607, A7775, A7776 |
|
G:A1837 |
|
A:A1839 |
1kd1 |
A8007 |
mer-3Oph |
U:A832(OP2), A:A1839(OP1), A:A1840(OP2) |
|
|
A3357, A7764, A9008 |
|
|
|
|
1kd1 |
A8008 |
mer-3Oph |
U:A919(OP1), C:A2464(OP1), A:A2465(OP1) |
|
|
A3625, A7768, A7854 |
|
G:A2466 |
|
|
1kd1 |
A8033 |
fac-3Oph·Ob |
A:A1747(OP2), U:A1748(OP2), G:A2585(OP1) |
|
U:A1749(O4) |
A3811, A9668 |
|
U:A2586 |
|
|
1kd1 |
C8065 |
Rout |
|
|
|
A3963, A9915, C8523, C8553, C8605, C8635 |
|
|
G:A782 |
|
1kd1 |
A8063 |
2Bout |
|
|
|
A4175, A7001, A7436, A7758, A7837, A7889 |
|
|
|
G:A1364, G:A1363 |
1kd1 |
A8071 |
2Pout·3Bout |
|
|
|
A4105, A6048, A7421, A7555, A7835, A7836 |
|
A:A1815, C:A1816 |
|
U:A1813, C:A1818, U:A1817 |
1kd1 |
L8069 |
Mg2+ bound by non-RNA |
|
|
|
A4236, A6039, L1797, L2121, L7871 |
ASN:L42(OD1) |
U:A1749, A:A2583, G:A2584, U:A2546 |
|
|
1kd1 |
A8056 |
Mg2+ bound by non-RNA |
A:A2757(OP1) |
|
|
A3664, A3968, A7838, A9974 |
ASN:D335(O) |
A:A2719, C:A2720, G:A2758 |
|
|
|