Mg2+ ion |
Site type |
Inner-sphere ligands |
Outer-sphere ligands |
---|
PDB ID |
Mg2+ ID |
Oph |
Or |
Ob+Nb |
Water |
Other |
Pout |
Rout |
Bout |
3v2d |
A3696 |
4Pout·2Bout |
|
|
|
A5676, A5677, A5678, A5679 |
|
G:A2578, A:A2051, U:A2613, A:A2614 |
|
A:A2051, A:A2614 |
3v2d |
A3650 |
5Pout |
|
|
|
A5501, A5502, A5503, A5504, A5505, A5506 |
|
G:A1606, G:A1303, A:A1608, C:A1304, C:A1607 |
|
|
3v2d |
A3390 |
Mg2+ bound by non-RNA |
|
|
G:A1192(N7) |
A4794, A4795, A4796, P313 |
HIS:P27(NE2) |
G:A1192, G:A1191 |
|
G:A1193, G:A1191 |
3v2d |
A3305 |
Mg2+ bound by non-RNA |
C:A2612(OP1) |
|
|
A4537, A4538, A4539, A4540 |
HIS:E132(NE2) |
U:A2611, G:A745 |
|
A:A746 |
3v2d |
A3552 |
Mg2+ bound by non-RNA |
G:A585(OP2) |
|
|
A5268, A5269, U306, U307 |
THR:U6(OG1) |
C:A584, G:A1250, C:A1251 |
|
G:A585 |
3v2d |
E306 |
Mg2+ bound by non-RNA |
|
|
|
A4875, A4876, E410, E411 |
ASP:E127(OD2) |
|
G:A1992 |
G:A1997 |
3v2d |
A3476 |
poly-nuclear Mg2+ site |
C:A1774(OP1) |
|
|
A5053, A5054, A5055, A5056, A5057 |
|
A:A1786, U:A1775 |
G:A1772 |
G:A1776, G:A1772 |
3v2d |
A3618 |
poly-nuclear Mg2+ site |
G:A212(OP2) |
|
|
A5244, A5432, A5433, A5434, A5435 |
|
G:A177, A:A213, G:A178 |
|
|
3v2d |
A3600 |
poly-nuclear Mg2+ site |
|
|
|
A5320, A5388, A5389, A5390, A5391, A5392 |
|
G:A495, G:A496 |
|
|
3v2d |
A3570 |
poly-nuclear Mg2+ site |
|
A:A503(O2') |
|
A5320, A5321, A5322, A5323 |
|
|
|
G:A506 |
3v2d |
B212 |
poly-nuclear Mg2+ site |
|
|
|
B318, B319, B320, B321, B322 |
|
G:B81 |
|
G:B82, G:B83 |
3v2d |
A3152 |
poly-nuclear Mg2+ site |
G:A1776(OP2) |
|
|
A4107, A4108, A4109, A4110, A4111 |
|
A:A1981, U:A1775 |
|
G:A1776 |
3v2d |
A3443 |
poly-nuclear Mg2+ site |
|
|
|
A4970, A4971, A4972, A4973, A4974 |
|
G:A1358, U:A1357, C:A1370 |
|
G:A1371 |
3v2d |
A3403 |
poly-nuclear Mg2+ site |
C:A453(OP1) |
|
G:A450(O6) |
A4844, A4845, A4846 |
|
A:A449, A:A454 |
|
A:A449 |
3v2d |
A3472 |
poly-nuclear Mg2+ site |
|
|
G:A1714(O6) |
A5043, A5044, A5045, A5046 |
|
|
|
G:A1717 |
3v2d |
A3655 |
poly-nuclear Mg2+ site |
|
|
|
A5519, A5520, A5521, A5522, A5523 |
|
G:A186, G:A187 |
|
G:A186, G:A187, G:A188, G:A189 |
3v2d |
A3540 |
poly-nuclear Mg2+ site |
|
|
|
A5242, A5243, A5244, A5245, A5432 |
|
A:A213, G:A177 |
|
G:A179, G:A180 |
|