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Center for Structural Genomics of Infectious Diseases
MgRNA: Classification of Mg
2+
binding sites in RNA crystal structures
Mg
2+
site K8069 in
1YJN
(3Å) -- RIBOSOME :
Crystal structure of clindamycin bound to the g2099a mutant 50s ribosomal subunit of haloarcula marismortui
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2+
binding sites being investigated
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Binding environment of Mg
2+
K8069
Mg
2+
bound by non-RNA
Inner
sphere
O
ph
O
r
O
b
+N
b
Water
03428, 04261, 06061, K2121, K7871
Other
ASN:K42(OD1)
Outer
sphere
P
out
U:01749, A:02583, G:02584
R
out
B
out
Each outer-sphere moiety is listed only once and only if it does not form inner-sphere interaction
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Inner-sphere Residue Name:
Outer-sphere Moiety Name:
Metal Distances:
Outer-sphere Distances:
B factor(Occupancy):
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Antialiasing:
On
Off
On
Off
On
Off
On
Off
On
Off
On
Off
On
Off
On
Off
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