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Structure of IDP00121

The crystal structure of the putative tRNA synthase from Salmonella typhimurium LT2

Edit deposit information
CSGID target
IDP00121 
PDB Id
3DQQ (NCBI MMDB
Authors
R.Zhang,M.Gu,M.Zhou,W.Anderson,A.Joachimiak,Center For Structural Genomics Of Infectious Diseases (Csgid) 
Responsible person
Rong-guang Zhang 
Responsible lab
Argonne National Laboratory 
Deposition Date
Jul 09, 2008 
Release Date
Jul 22, 2008 

Annotation

Description
We have solved the 2.7A structure of the putative tRNA synthase from Salmonella typhimurium. The further function studies is critical for this project.  
Functional assignment
tRNA synthase 

Ligands

Ligand code Name Ligand type

Structure information

Unit cell parameters

Space Group
P 64 2 2  
Unit Cell

a=254.54Å, b=254.54Å, c=94.46Å
α=90.00, β=90.00, γ=120.00 
Solvent content
75  
Matthews coefficient
4.92  

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
127.00-2.70Å (2.77-2.70Å)  
Rall(%)
18.9 
Rwork(%)
18.8 (28.4) 
Rfree(%)
21.0 (28.7) 
Num. observed reflections
49672 (3595) 
Num. Rfree reflections
2533 (176) 
Completeness(%)
99.9 (99.6) 

Model parameters

Num Atoms
6264  
Num Waters
45  
Num Hetatoms
0  
Model mean isotropic B factor
39.832Å2  
RMSD bond length
0.018Å  
RMSD bond angle
1.718°  
Filename uploaded
IDP00121_3DQQ_AJ.pdb (uploaded on Oct 27, 2008 12:28 PM)  
Inserted
Oct 27, 2008