Structure of IDP01616

Dodecameric structure of spermidine N-acetyltransferase from Vibrio cholerae

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CSGID target
IDP01616 
PDB Id
4JLY (NCBI MMDB) 
Authors
E.V.Filippova,G.Minasov,L.Shuvalova,O.Kiryukhina,M.L.Kuhn,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid) 
Responsible person
Ekaterina Filippova 
Responsible lab
Northwestern University 
Deposition Date
Mar 13, 2013 
Release Date
Apr 03, 2013 

Annotation

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Ligands

Ligand code Name Ligand type
175 3,5-dihydro-5-methylidene-4h-imidazol-4-on

Structure information

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Unit cell parameters

Space Group
C 1 2 1  
Unit Cell

a=194.86Å, b=71.77Å, c=136.73Å
α=90.00, β=134.53, γ=90.00 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
28.91-2.88Å (2.96-2.88Å)  
Rall(%)
19.0 
Rwork(%)
18.5 (28.8) 
Rfree(%)
27.7 (35.4) 
Num. observed reflections
30399 (2062) 
Num. Rfree reflections
1519 (120) 
Completeness(%)
99.0 (91.3) 

Model parameters

Num Atoms
8675  
Num Waters
30  
Num Hetatoms
55  
Model mean isotropic B factor
84.090Å2  
RMSD bond length
0.012Å  
RMSD bond angle
1.557°  
Filename uploaded
4JLY(1).pdb (uploaded on Sep 06, 2013 12:37 PM)  
Inserted
Sep 06, 2013