Structure of IDP04364

Inosine 5''-monophosphate dehydrogenase from Vibrio cholerae, deletion mutant, in complex with XMP and NAD

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CSGID target
IDP04364 
PDB Id
4X3Z (NCBI MMDB) 
Authors
'J.Osipiuk,N.Maltseva,Y.Kim,R.Mulligan,M.Makowska-Grzyska,M.Gu,W.F.Anderson,A.Joachimiak,Center For Structural Genomics Of Infectious Diseases (Csgid)' 
Responsible person
Jerzy Osipiuk 
Responsible lab
Argonne National Laboratory 
Deposition Date
Dec 02, 2014 
Release Date
Dec 10, 2014 

Annotation

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Ligands

Ligand code Name Ligand type
NAD biological
K biological
GOL glycerol crystallization
PO4 crystallization
175 3,5-dihydro-5-methylidene-4h-imidazol-4-on

Structure information

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Unit cell parameters

Space Group
P 4 21 2  
Unit Cell

a=91.26Å, b=91.26Å, c=171.21Å
α=90.00, β=90.00, γ=90.00 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
44.20-1.62Å (1.66-1.62Å)  
Rall(%)
15.3 
Rwork(%)
15.2 (21.4) 
Rfree(%)
18.2 (24.5) 
Num. observed reflections
92414 (6745) 
Num. Rfree reflections
4528 (323) 
Completeness(%)
99.9 (100.0) 

Model parameters

Num Atoms
5200  
Num Waters
563  
Num Hetatoms
728  
Model mean isotropic B factor
23.900Å2  
RMSD bond length
0.015Å  
RMSD bond angle
1.919°  
Filename uploaded
IDP04364-IMPNAD_dep3.pdb (uploaded on Dec 03, 2014 12:35 PM)  
Inserted
Dec 03, 2014