Structure of IDP97218

Crystal Structure of the Metallo-beta-lactamase L1 from Stenotrophomonas maltophilia in the Complex with Hydrolyzed Imipnem

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CSGID target
IDP97218 
PDB Id
6UAF (NCBI MMDB) 
Authors
'Y.Kim,N.Maltseva,M.Endres,A.Joachimiak,Center For Structural Genomics Of Infectious Diseases (Csgid)' 
Responsible person
Youngchang Kim 
Responsible lab
Argonne National Laboratory 
Deposition Date
Sep 10, 2019 
Release Date
Sep 18, 2019 

Annotation

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Ligands

Ligand code Name Ligand type
ZN zinc biological
HIW (2r,4s)-2-[(1s,2r)-1-carboxy-2-hydroxypropyl]-4-[(2-{[( z)-iminomethyl]amino}ethyl)sulfanyl]-3,4-dihydro-2h-pyr role-5-carboxylic acid biological

Structure information

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Unit cell parameters

Space Group
P 64 2 2  
Unit Cell

a=104.83Å, b=104.83Å, c=98.63Å
α=90.00, β=90.00, γ=120.00 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
34.32-1.89Å (1.93-1.90Å)  
Rall(%)
17.4 
Rwork(%)
17.2 (21.3) 
Rfree(%)
20.8 (25.5) 
Num. observed reflections
26477 (2769) 
Num. Rfree reflections
1329 (125) 
Completeness(%)
96.9 (98.0) 

Model parameters

Num Atoms
2017  
Num Waters
222  
Num Hetatoms
245  
Model mean isotropic B factor
26.780Å2  
RMSD bond length
0.006Å  
RMSD bond angle
0.780°  
RMSD dihedral angle
10.37°
 
Filename uploaded
dep-f1.pdb (uploaded on Nov 06, 2019 9:54 AM)  
Inserted
Nov 06, 2019