Structure of IDP98672

Crystal structure of a trimethoprim-resistant dihydrofolate reductase enzyme from an uncultured soil bacterium

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CSGID target
IDP98672 
PDB Id
8F09 (NCBI MMDB) 
Authors
Stogios PJ, Evdokimova E, Borek D, Di Leo R, Semper C, Savchenko A, Joachimiak A, Satchell KJF, Center for Structural Genomics of Infectious Diseases (CSGID) 
Responsible person
Peter Stogios 
Responsible lab
University of Calgary 
Deposition Date
Nov 02, 2022 
Release Date
 

Annotation

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Ligands

Ligand code Name Ligand type
SO4 sulfate crystallization

Structure information

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Unit cell parameters

Space Group
P 1  
Unit Cell

a=36.07Å, b=41.99Å, c=70.38Å
α=82.00, β=90.00, γ=72.10 
Solvent content
 
Matthews coefficient
 

Refinement

Data for the highest resolution shell is in parentheses.
Resolution range
34.29-2.45Å (2.69-2.45Å)  
Rall(%)
29.2 
Rwork(%)
28.9 (31.2) 
Rfree(%)
34.9 (44.2) 
Num. observed reflections
11145 (1369) 
Num. Rfree reflections
531 (81) 
Completeness(%)
74.1 (41.0) 

Model parameters

Num Atoms
2710  
Num Waters
72  
Num Hetatoms
97  
Model mean isotropic B factor
51.310Å2  
RMSD bond length
0.002Å  
RMSD bond angle
0.611°  
RMSD dihedral angle
18.62°
 
Filename uploaded
D_1000269739_model-annotate_P1.pdb (uploaded on Nov 04, 2022 12:59 PM)  
Inserted
Nov 04, 2022