X-ray Structures

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    Title: SARS

Page 2 of 4, showing 20 records  out of 75 total, starting on record 21 structures.
Click on the title of a structure below to see more information about that structure.

Target CPX_52010_52016

Title: Crystal Structure of SARS-CoV-2 Nsp16/10 Heterodimer in Complex with (m7GpppA2m)pUpUpApApA (Cap-1), S-Adenosyl-L-homocysteine (SAH) and two Magnesium (Mg) ions.
Authors: Minasov, G., Shuvalova, L., Rosas-Lemus, M., Kiryukhina, O., Brunzelle, J.S., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7L6T (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: , , , 2'-o-methyl-adenosine-5'-monophosphate, 7n-methyl-8-hydroguanosine-5'-diphosphate, magnesium, unknown, unknown
Other ligands: , , beta-d-fructopyranose
R: 14.2%
Rfree: 16.2%
Resolution: 1.78Å
Deposited: 2020-12-23
Released: 2021-01-06

Target IDP52005

Title: The crystal structure of SARS-CoV-2 Main Protease in complex with demethylated analog of masitinib
Authors: K.Tan, N.I.Maltseva, R.P.Jedrzejczak, A.Joachimiak, Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7L5D (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with:
Other ligands: , glycerol
R: 17.8%
Rfree: 20.1%
Resolution: 1.58Å
Deposited: 2020-12-21
Released: 2020-12-30
Title: The crystal structure of SARS-CoV-2 Main Protease with the formation of Cys145-1H-indole-5-carboxylate
Authors: K.Tan, N.I.Maltseva, R.P.Jedrzejczak, A.Joachimiak, Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7KYU (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with:
Other ligands:
R: 16.2%
Rfree: 18.7%
Resolution: 1.48Å
Deposited: 2020-12-08
Released: 2020-12-16

Target IDP52003

Title: The crystal structure of Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with PLP_Snyder441
Authors: Osipiuk, J., Tesar, C., Endres, M., Lisnyak, V., Maki, S., Taylor, C., Zhang, Y., Zhou, Z., Azizi, S.A., Jones, K., Kathayat, R., Snyder, S.A., Dickinson, B.C., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7KRX (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: , 3-amino-2-methyl-N-[(1R)-1-(naphthalen-1-yl)ethyl]benzamide
Other ligands: , , Unknown atom
R: 21.2%
Rfree: 24.9%
Resolution: 2.72Å
Deposited: 2020-11-20
Released:

Target CPX_52010_52016

Title: Room Temperature Structure of SARS-CoV-2 Nsp10/16 Methyltransferase in a Complex with Cap-0 and SAM Determined by Pink-Beam Serial Crystallography
Authors: Wilamowski, M., Sherrell, D.A., Minasov, G., Shuvalova, L., Lavens, A., Henning, R., Maltseva, N., Rosas-Lemus, M., Kim, Y., Satchell, K.J.F., Srajer, V., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7KOA (PDBSUM) (Profunc) (GPSS) (MMDB)
R: 23.6%
Rfree: 27.7%
Resolution: 2.4Å
Deposited: 2020-11-17
Released: 2020-11-18

Target IDP52003

Title: The crystal structure of Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with PLP_Snyder496
Authors: Osipiuk, J., Tesar, C., Endres, M., Lisnyak, V., Maki, S., Taylor, C., Zhang, Y., Zhou, Z., Azizi, S.A., Jones, K., Kathayat, R., Snyder, S.A., Dickinson, B.C., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7KOK (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: , unknown
Other ligands: , , MES, Unknown atom
R: 18.5%
Rfree: 21.1%
Resolution: 2Å
Deposited: 2020-11-09
Released:
Title: The crystal structure of Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with PLP_Snyder494
Authors: Osipiuk, J., Tesar, C., Endres, M., Lisnyak, V., Maki, S., Taylor, C., Zhang, Y., Zhou, Z., Azizi, S.A., Jones, K., Kathayat, R., Snyder, S.A., Dickinson, B.C., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7KOJ (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: , unknown
Other ligands: , , MES, Unknown atom
R: 18.4%
Rfree: 20.3%
Resolution: 2.02Å
Deposited: 2020-11-09
Released:
Title: The crystal structure of Papain-Like Protease of SARS CoV-2 in complex with PLP_Snyder496
Authors: Osipiuk, J., Tesar, C., Endres, M., Lisnyak, V., Maki, S., Taylor, C., Zhang, Y., Zhou, Z., Azizi, S.A., Jones, K., Kathayat, R., Snyder, S.A., Dickinson, B.C., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7KOL (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: , unknown
Other ligands: , MES
R: 18.9%
Rfree: 20.6%
Resolution: 2.58Å
Deposited: 2020-11-09
Released:
Title: Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with Jun9-84-3 inhibitor
Authors: Osipiuk, J., Tesar, C., Endres, M., Wang, J., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7SQE (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: , unknown
Other ligands: ,
R: 17.5%
Rfree: 20.5%
Resolution: 2Å
Deposited: 2020-11-05
Released:
Title: Crystal structure of the ubiquitin-like domain 1 (Ubl1) of Nsp3 from SARS-CoV-2
Authors: Stogios PJ, Skarina T, Chang C, Kim Y, Di Leo R, Savchenko A, Joachimiak A, Satchell KJF, Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7KAG (PDBSUM) (Profunc) (GPSS) (MMDB)
Other ligands: ,
R: 21.8%
Rfree: 24.8%
Resolution: 3.21Å
Deposited: 2020-09-30
Released: 2020-10-14

Target IDP52001

Title: Crystal Structure of NSP1 from SARS-CoV-2
Authors: Semper, C., Watanabe, N., Chang, C., Savchenko, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7K3N (PDBSUM) (Profunc) (GPSS) (MMDB)
R: 20.8%
Rfree: 24.8%
Resolution: 1.65Å
Deposited: 2020-09-11
Released:

Target IDP52015

Title: Crystal Structure of NSP15 Endoribonuclease from SARS CoV-2 in the Complex with Uridine-2'',3''-Vanadate
Authors: Kim, Y., Maltseva, N., Jedrzejczak, R., Endres, M., Welk, L., Chang, C., Michalska, K., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7K1L (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: uridine-2',3'-vanadate
Other ligands: , ,
R: 17.2%
Rfree: 19.1%
Resolution: 2.25Å
Deposited: 2020-09-07
Released: 2020-09-23
Title: Crystal Structure of NSP15 Endoribonuclease from SARS CoV-2 in the Complex with Uridine-3'',5''-Diphosphate
Authors: Kim, Y., Maltseva, N., Jedrzejczak, R., Endres, M., Welk, L., Chang, C., Michalska, K., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7K1O (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: ethyl 4-(2-cyanoethylsulfanyl)-6-methoxy-quinoline-3-ca rboxylate
Other ligands:
R: 20.9%
Rfree: 24.3%
Resolution: 2.4Å
Deposited: 2020-09-07
Released: 2020-09-23

Target CPX_52010_52016

Title: Crystal Structure of SARS-CoV-2 Nsp16/10 Heterodimer in Complex with (m7GpppA2m)pUpUpApApA (Cap-1) and S-Adenosyl-L-homocysteine (SAH).
Authors: Minasov, G., Shuvalova, L., Rosas-Lemus, M., Kiryukhina, O., Brunzelle, J.S., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7JZ0 (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: , , 2'-o-methyl-adenosine-5'-monophosphate, 7n-methyl-8-hydroguanosine-5'-diphosphate, unknown, unknown
Other ligands: , ,
R: 17.5%
Rfree: 19.8%
Resolution: 2.15Å
Deposited: 2020-09-01
Released: 2020-09-16
Title: Crystal Structure of SARS-CoV-2 Nsp16/10 Heterodimer in Complex with (m7GpppA)pUpUpApApA (Cap-0) and S-Adenosylmethionine (SAM).
Authors: Minasov, G., Shuvalova, L., Rosas-Lemus, M., Kiryukhina, O., Brunzelle, J.S., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7JYY (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: , 7n-methyl-8-hydroguanosine-5'-diphosphate, magnesium, s-adenosylmethionine, unknown, unknown
Other ligands: , ,
R: 16.7%
Rfree: 18.5%
Resolution: 2.05Å
Deposited: 2020-09-01
Released: 2020-09-16

Target IDP51007

Title: STRUCTURE OF THE SARS-CoV-2 ORF8 ENCODED ACCESSORY PROTEIN
Authors: Hall, P.D., Nelson, C.A., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7JX6 (PDBSUM) (Profunc) (GPSS) (MMDB)
R: 20.37%
Rfree: 23.4%
Resolution: 1.61Å
Deposited: 2020-08-26
Released: 2020-09-23

Target IDP52005

Title: The crystal structure of SARS-CoV-2 Main Protease in complex with masitinib
Authors: K. Tan, N.I. Maltseva, L.F. Welk, R.P. Jedrzejczak, A. Joachimiak, Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7JU7 (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with:
Other ligands: , glycerol
R: 17%
Rfree: 19.1%
Resolution: 1.6Å
Deposited: 2020-08-19
Released:

Target IDP52003

Title: The crystal structure of Papain-Like Protease of SARS CoV-2 in complex with PLP_Snyder441
Authors: Osipiuk, J., Tesar, C., Endres, M., Lisnyak, V., Maki, S., Taylor, C., Zhang, Y., Zhou, Z., Azizi, S.A., Jones, K., Kathayat, R., Snyder, S.A., Dickinson, B.C., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7JN2 (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: , 3-amino-2-methyl-N-[(1R)-1-(naphthalen-1-yl)ethyl]benzamide
Other ligands: , , Unknown atom
R: 18.7%
Rfree: 20.9%
Resolution: 1.93Å
Deposited: 2020-08-03
Released: 2020-08-12
Title: The crystal structure of Papain-Like Protease of SARS CoV-2 , C111S mutant, in complex with PLP_Snyder457
Authors: Osipiuk, J., Tesar, C., Endres, M., Lisnyak, V., Maki, S., Taylor, C., Zhang, Y., Zhou, Z., Azizi, S.A., Jones, K., Kathayat, R., Snyder, S.A., Dickinson, B.C., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7JIR (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: , 5-amino-2-methyl-n-[(1r)-1-naphthalen-1-ylethyl]benzami de
Other ligands: , , MES
R: 18.7%
Rfree: 20%
Resolution: 2.09Å
Deposited: 2020-07-23
Released: 2020-08-05
Title: The crystal structure of Papain-Like Protease of SARS CoV-2 , C111S mutant, in complex with PLP_Snyder495
Authors: Osipiuk, J., Tesar, C., Endres, M., Lisnyak, V., Maki, S., Taylor, C., Zhang, Y., Zhou, Z., Azizi, S.A., Jones, K., Kathayat, R., Snyder, S.A., Dickinson, B.C., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB 7JIT (PDBSUM) (Profunc) (GPSS) (MMDB)
Complexed with: , 5-[(carbamoylcarbamoyl)amino]-2-methyl-N-[(1R)-1-(naphthalen-1-yl)ethyl]benzamide
Other ligands: , , MES
R: 17.6%
Rfree: 19%
Resolution: 1.95Å
Deposited: 2020-07-23
Released: 2020-08-05
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